RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SERAC1Q96JX3 654 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 CAPNS2Q96L46 248 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 LURAP1Q96LR2 239 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 FAM210AQ96ND0 272 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 VPS35Q96QK1 796 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 ACCSQ96QU6 501 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 SLC30A2Q9BRI3 323 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 RIOK1Q9BRS2 568 aaKnown RBP1.55□□□□□ -2.16
USP9X-208ENST00000487625 CHRDL1Q9BU40 450 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 NUP58Q9BVL2 599 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 ERVK-6Q9BXR3 956 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 GON7Q9BXV9 100 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 ANKRD60Q9BZ19 345 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 NACA2Q9H009 215 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 IQCGQ9H095 443 aaKnown RBP1.55□□□□□ -2.16
USP9X-208ENST00000487625 POLR3FQ9H1D9 316 aaPredicted RBP1.55□□□□□ -2.16
USP9X-208ENST00000487625 SLC26A1Q9H2B4 701 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 HAUS4Q9H6D7 363 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 DCLRE1BQ9H816 532 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 MEAF6Q9HAF1 191 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 RAVER2Q9HCJ3 691 aaKnown RBP1.55□□□□□ -2.16
USP9X-208ENST00000487625 MRPS30Q9NP92 439 aaKnown RBP1.55□□□□□ -2.16
USP9X-208ENST00000487625 RDH8Q9NYR8 311 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 ZNF581Q9P0T4 197 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 ONECUT1Q9UBC0 465 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 COPS7AQ9UBW8 275 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 IL36AQ9UHA7 158 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 FBXL4Q9UKA2 621 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 GSTK1Q9Y2Q3 226 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 CCDC7Q96M83 1385 aa1.55□□□□□ -2.16
USP9X-208ENST00000487625 PPIAL4EA0A075B759 164 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 LOC100506127A0A0U1RQW1 187 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 HEATR9A2RTY3 570 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FRG2CA6NGY1 282 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FBLL1A6NHQ2 334 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 IQCF5A8MTL0 148 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NPIPA7E9PJI5 369 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 K7ERQ8 282 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ZNF701M0R085 212 aaPredicted RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 P2RX6O15547 441 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ZNF208O43345 1280 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 AKR7A2O43488 359 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TSPAN2O60636 221 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 JAK2O60674 1132 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SCGNO76038 276 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 LY6G6DO95868 133 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TGM6O95932 706 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 RENP00797 406 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 IGHG3P01860 377 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 CHRNGP07510 517 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 DCNP07585 359 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 ALPIP09923 528 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NPIPA8P0DM63 369 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PPIAL4FP0DN26 164 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 MCF2P10911 925 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PNMTP11086 282 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 CCNB1P14635 433 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 B4GALT1P15291 398 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GOT1P17174 413 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PAICSP22234 425 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 GLRA1P23415 457 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ANXA13P27216 316 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 EPS15P42566 896 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 CRYBB2P43320 205 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SYKP43405 635 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NAMPTP43490 491 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 CCT3P49368 545 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 NDST2P52849 883 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NDUFV3P56181 108 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 NLRP11P59045 1033 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 DAOAP59103 153 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 DCDC1P59894 354 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 LIPEQ05469 1076 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 BST2Q10589 180 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 TRDNQ13061 729 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SRSF9Q13242 221 aaKnown RBP eCLIP1.54□□□□□ -2.16
USP9X-208ENST00000487625 ITPK1Q13572 414 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GRB14Q14449 540 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GANABQ14697 944 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 EXOSC7Q15024 291 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 CHRNA6Q15825 494 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FAM83EQ2M2I3 478 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 Q3ZCU0 254 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 USH1GQ495M9 461 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GPAT3Q53EU6 434 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SFT2D3Q587I9 215 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 C10orf120Q5SQS8 335 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 C1orf189Q5VU69 101 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SNRNP48Q6IEG0 339 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 FAM71F2Q6NXP2 309 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TMEM220Q6QAJ8 160 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SCARA5Q6ZMJ2 495 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FCRLAQ7L513 359 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 RANBP3LQ86VV4 465 aaPredicted RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 NKAIN4Q8IVV8 208 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 KATNAL2Q8IYT4 538 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FAM89BQ8N5H3 189 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PQLC3Q8N755 202 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GATSQ8NAP1 163 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 CSNK1G2-AS1Q8NCQ2 148 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms