RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 DUSP22Q9NRW4 184 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CBLCQ9ULV8 474 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 MEIOCA2RUB1 952 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 A8MU76 341 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 J3QRE1 110 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 NTN1O95631 604 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 GPR75O95800 540 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 CCR5P51681 352 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 NKX2-5P52952 324 aaPredicted RBP24.27■■□□□ 1.48
HLA-C-208ENST00000487245 EEF1A1P68104 462 aaKnown RBP24.27■■□□□ 1.48
HLA-C-208ENST00000487245 LHFPL3Q86UP9 236 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF619Q8N2I2 560 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 VWA5B2Q8N398 1253 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 OR2T33Q8NG76 320 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 BRIX1Q8TDN6 353 aaKnown RBP24.27■■□□□ 1.48
HLA-C-208ENST00000487245 IL21RQ9HBE5 538 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 CD207Q9UJ71 328 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 N6AMT1Q9Y5N5 214 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 F5P12259 2224 aa24.27■■□□□ 1.48
HLA-C-208ENST00000487245 FANCMQ8IYD8 2048 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 STX11O75558 287 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 LALBAP00709 142 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 GPR4P46093 362 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 RIN1Q13671 783 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 SHFQ7M4L6 423 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 OR13H1Q8NG92 308 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 OR4F15Q8NGB8 312 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 PHOX2BQ99453 314 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 EVA1AQ9H8M9 152 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 HRASLS2Q9NWW9 162 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 NTNG1Q9Y2I2 539 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 LRP4O75096 1905 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 DNAJB6O75190 326 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 SOX30O94993 753 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 RPS4Y1P22090 263 aaKnown RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF136P52737 540 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 SF3B4Q15427 424 aaKnown RBP eCLIP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 TRMT12Q53H54 448 aaKnown RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 GID4Q8IVV7 300 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 TMEM255BQ8WV15 326 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 DNAJA4Q8WW22 397 aaPredicted RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 DEPDC7Q96QD5 511 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 C11orf54Q9H0W9 315 aaPredicted RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 TP63Q9H3D4 680 aaPredicted RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 FN3KQ9H479 309 aa24.26■■□□□ 1.47
HLA-C-208ENST00000487245 USP36Q9P275 1121 aaKnown RBP24.26■■□□□ 1.47
HLA-C-208ENST00000487245 PIP5K1CO60331 668 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 SOX18P35713 384 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 HOXC5Q00444 222 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 TAB1Q15750 504 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 TMEM31Q5JXX7 168 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 TP53INP1Q96A56 240 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 PPP1R3EQ9H7J1 279 aa24.25■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF223Q9UK11 482 aaPredicted RBP24.25■■□□□ 1.47
HLA-C-208ENST00000487245 CCDC182A6NF36 153 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CYR61O00622 381 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CASKO14936 926 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 GLULP15104 373 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 NT5EP21589 574 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 LSSP48449 732 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 PYDC2Q56P42 97 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 DCST2Q5T1A1 773 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 RNF113BQ8IZP6 322 aaKnown RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CSNK1A1LQ8N752 337 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CAPSLQ8WWF8 208 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 ZC3HAV1LQ96H79 300 aaKnown RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 ATF6BQ99941 703 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 ADAP2Q9NPF8 381 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 POLE3Q9NRF9 147 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 H2AFY2Q9P0M6 372 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 RBMX2Q9Y388 322 aaKnown RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 TRAPPC13A5PLN9 417 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 FAM172BPA6NC97 362 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 GABRPO00591 440 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 LRRTM2O43300 516 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 IDH3BO43837 385 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 GALR3O60755 368 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CH25HO95992 272 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 S100A1P23297 94 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 TFF2Q03403 129 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 GPR68Q15743 365 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 LCN1P1Q5VSP4 162 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 KIAA0895LQ68EN5 471 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF322Q6U7Q0 402 aaPredicted RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 CAMKK1Q8N5S9 505 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 HMGB4Q8WW32 186 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 PRSS27Q9BQR3 290 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 UBQLN3Q9H347 655 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 HINT3Q9NQE9 182 aaKnown RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 EVA1BQ9NVM1 165 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 TNFRSF10DQ9UBN6 386 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 SLC7A7Q9UM01 511 aa24.24■■□□□ 1.47
HLA-C-208ENST00000487245 MRPS2Q9Y399 296 aaKnown RBP24.24■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF860A6NHJ4 632 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 B4DXG7 233 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 PLA2G10O15496 165 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 FGF17O60258 216 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 FMO6PO60774 539 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 PVRP15151 417 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 LTBRP36941 435 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms