RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
PFDN4-204ENST00000487129 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
PFDN4-204ENST00000487129 A0A087WZY1 265 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 GXYLT2A0PJZ3 443 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 UBFD1O14562 309 aaKnown RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 ABCD4O14678 606 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 EFNA2O43921 213 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 ESRRBO95718 433 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 PGRP06401 933 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 FESP07332 822 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 COL6A2P12110 1019 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 TTKP33981 857 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 PHBP35232 272 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 SPOCK1Q08629 439 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 UBAP2Q5T6F2 1119 aaKnown RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 BHLHA15Q7RTS1 189 aaPredicted RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 OR4C3Q8NH37 302 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 ZNF483Q8TF39 744 aaPredicted RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 FAM168AQ92567 244 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 HOXB13Q92826 284 aaPredicted RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 CBLN4Q9NTU7 201 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 NINJ2Q9NZG7 142 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 VPS29Q9UBQ0 182 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 DMGDHQ9UI17 866 aaKnown RBP13.18□□□□□ -0.3
PFDN4-204ENST00000487129 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
PFDN4-204ENST00000487129 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 H7C417 338 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 KCNAB3O43448 404 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 PCDH7O60245 1069 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 DLX3O60479 287 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 TSPAN8P19075 237 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 USF1P22415 310 aaPredicted RBP13.17□□□□□ -0.3
PFDN4-204ENST00000487129 MAP3K8P41279 467 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 RFX3P48380 749 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 CDH13P55290 713 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 PPA1Q15181 289 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 Q6ZT83 130 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
PFDN4-204ENST00000487129 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 NOA1Q8NC60 698 aaKnown RBP13.17□□□□□ -0.3
PFDN4-204ENST00000487129 ACTRT2Q8TDY3 377 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 PROX1Q92786 737 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 MSI2Q96DH6 328 aaKnown RBP13.17□□□□□ -0.3
PFDN4-204ENST00000487129 APIPQ96GX9 242 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 C1orf159Q96HA4 380 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 USB1Q9BQ65 265 aaKnown RBP13.17□□□□□ -0.3
PFDN4-204ENST00000487129 ACPTQ9BZG2 426 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 COQ10BQ9H8M1 238 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 Q9N2J8 555 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 SNX6Q9UNH7 406 aa13.17□□□□□ -0.3
PFDN4-204ENST00000487129 MANBAO00462 879 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 SPRY1O43609 319 aaPredicted RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 LYZL6O75951 148 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 LY6HO94772 140 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 OXSR1O95747 527 aaPredicted RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 OTCP00480 354 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 JUNP05412 331 aaKnown RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 NGFRP08138 427 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 SBK3P0C264 359 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 LINGO3P0C6S8 592 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 COX5AP20674 150 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 MPIP34949 423 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 CLK3P49761 638 aaKnown RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 MANFP55145 182 aaKnown RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 CARD18P57730 90 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 SLC18A2Q05940 514 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 RNPS1Q15287 305 aaKnown RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 GTF2IRD2BQ6EKJ0 949 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 KLC3Q6P597 504 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 Q6ZSR9 355 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 ZAR1Q86SH2 424 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 GTF2IRD2Q86UP8 949 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 DHRS9Q9BPW9 319 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 PRR14Q9BWN1 585 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 C1QTNF3Q9BXJ4 246 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 CHODLQ9H9P2 273 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
PFDN4-204ENST00000487129 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
PFDN4-204ENST00000487129 SLITRK5O94991 958 aa13.15□□□□□ -0.3
PFDN4-204ENST00000487129 OR4F21O95013 312 aa13.15□□□□□ -0.3
PFDN4-204ENST00000487129 PGM3O95394 542 aa13.15□□□□□ -0.3
PFDN4-204ENST00000487129 YES1P07947 543 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms