RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MR1Q95460 341 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 GTPBP3Q969Y2 492 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SLC41A3Q96GZ6 507 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 GAL3ST4Q96RP7 486 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 LPAR4Q99677 370 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PITX2Q99697 317 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NIPSNAP1Q9BPW8 284 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 WFDC6Q9BQY6 131 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FUZQ9BT04 418 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CRB3Q9BUF7 120 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NUDT9Q9BW91 350 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 DGCR6LQ9BY27 220 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TRIM2Q9C040 744 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 ADNPQ9H2P0 1102 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TMEM27Q9HBJ8 222 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CTPS2Q9NRF8 586 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 UBQLN4Q9NRR5 601 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SEMA4GQ9NTN9 838 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 RLIMQ9NVW2 624 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TUBA8Q9NY65 449 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NCDNQ9UBB6 729 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NDRG4Q9ULP0 352 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SLC35A3Q9Y2D2 325 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CHST2Q9Y4C5 530 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PCDHGB5Q9Y5G0 923 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 ASCC3Q8N3C0 2202 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SERINC4A6NH21 518 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CLDN24A6NM45 220 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NPIPB9F8W1W9 429 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SCDO00767 359 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TO15178 435 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TPST2O60704 377 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CBFA2T3O75081 653 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SEMA7AO75326 666 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 REM1O75628 298 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CSTAP01040 98 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 IGKV1D-16P01601 117 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 IGHEP01854 428 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 JMJD7P0C870 316 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CCL4P13236 92 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CYP4B1P13584 511 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 OSMP13725 252 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 POU2F1P14859 743 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ENDOUP21128 410 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 EEF1B2P24534 225 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 GGT2P36268 569 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 POLR2IP36954 125 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ADH7P40394 386 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RPL5P46777 297 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NR0B1P51843 470 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF136P52737 540 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CRISP1P54107 249 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 PNLIPRP2P54317 469 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NR1H2P55055 460 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NRG3P56975 720 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 GABARAPL2P60520 117 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CDC42P60953 191 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ISL1P61371 349 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CSNK2BP67870 215 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TUBA4AP68366 448 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RPP38P78345 283 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ALDH6A1Q02252 535 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CD47Q08722 323 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 EIF3IQ13347 325 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RAPSNQ13702 412 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SEC23BQ15437 767 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 OR1Q1Q15612 314 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NNATQ16517 81 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CCDC157Q569K6 752 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 C6orf141Q5SZD1 244 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF770Q6IQ21 691 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 C1orf94Q6P1W5 598 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 PGBD2Q6P3X8 592 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF613Q6PF04 617 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 PAPD4Q6PIY7 484 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 KLHL17Q6TDP4 642 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TMEM205Q6UW68 189 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CD300LDQ6UXZ3 194 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SHISA6Q6ZSJ9 500 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 LANCL3Q6ZV70 420 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RAB11FIP2Q7L804 512 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 GDF7Q7Z4P5 450 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CPEB2Q7Z5Q1 589 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ZAR1Q86SH2 424 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RNF113BQ8IZP6 322 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF321PQ8N8H1 164 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 KDF1Q8NAX2 398 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 B3GNT7Q8NFL0 401 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 OR4K5Q8NGD3 323 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SLC7A13Q8TCU3 470 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ADAMTS16Q8TE57 1224 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ACOT11Q8WXI4 607 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 CNOT9Q92600 299 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ADIPOR1Q96A54 375 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TP53INP1Q96A56 240 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RNF31Q96EP0 1072 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms