RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RENP00797 406 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 WNT4P56705 351 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 CD83Q01151 205 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 MFSD12Q6NUT3 480 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 TANKQ92844 425 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 TBC1D20Q96BZ9 403 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 C7orf34Q96L11 122 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 IER3IP1Q9Y5U9 82 aa12.36□□□□□ -0.43
HMGN1-216ENST00000486741 A0A087WUU8 490 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 FGF17O60258 216 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 MAOAP21397 527 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 GNALP38405 381 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 NKX2-5P52952 324 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ACSM5Q6NUN0 579 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 LACC1Q8IV20 430 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SLC35A4Q96G79 324 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 TMEM138Q9NPI0 162 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ATP13A2Q9NQ11 1180 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SEMA4GQ9NTN9 838 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 DAPP1Q9UN19 280 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 RNF13O43567 381 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 NARSO43776 548 aaKnown RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SOD1P00441 154 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 RLN1P04808 185 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 STAT5AP42229 794 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 YPEL5P62699 121 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SEC23BQ15437 767 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ZER1Q7Z7L7 766 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SPRYD4Q8WW59 207 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 MSLNLQ96KJ4 702 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 CNDP2Q96KP4 475 aaKnown RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SEC61A2Q9H9S3 476 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 THSD1Q9NS62 852 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 DLGAP1O14490 977 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 DUX1O43812 170 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 BMP4P12644 408 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 GP1BBP13224 206 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 FBLP22087 321 aaKnown RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 MAN2A2P49641 1150 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 TP53I3Q53FA7 332 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 WDR45BQ5MNZ6 344 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 FOXQ1Q9C009 403 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 EXTL2Q9UBQ6 330 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 FBXO9Q9UK97 447 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-216ENST00000486741 ERVK-11Q9UQG0 969 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
HMGN1-216ENST00000486741 GXYLT2A0PJZ3 443 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 OPN1LWP04000 364 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 GIMD1P0DJR0 217 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 MYF5P13349 255 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF823P16415 610 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 NIPAL1Q6NVV3 410 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 GID4Q8IVV7 300 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 SFTPA2Q8IWL1 248 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 NR4A3Q92570 626 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 FUOMA2VDF0 154 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF45Q02386 682 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ILKQ13418 452 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 AQP6Q13520 282 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 DCDC5Q6ZRR9 648 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PRSS41Q7RTY9 318 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 NUP54Q7Z3B4 507 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 SFXN5Q8TD22 340 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 DUSP21Q9H596 190 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 C14orf105Q9NVL8 296 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 NYNRINQ9P2P1 1898 aaKnown RBP12.34□□□□□ -0.43
HMGN1-216ENST00000486741 TRBV5-3A0A0A0MS03 114 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 C2CD4DB7Z1M9 353 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 SOCS6O14544 535 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 EML2O95834 649 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 HEXBP07686 556 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 FUT1P19526 365 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 HOXD12P35452 270 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ERVK-25P63136 954 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ZNF517Q6ZMY9 492 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-216ENST00000486741 USP51Q70EK9 711 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PCDHGB7Q9Y5F8 929 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PCDHGB6Q9Y5F9 930 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 RP1P56715 2156 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 HYAL3O43820 417 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-216ENST00000486741 RAD1O60671 282 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 RUNX2Q13950 521 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
HMGN1-216ENST00000486741 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms