RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 F8VP50 259 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 H3BN98 237 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PDHXO00330 501 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TFECO14948 347 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SURF4O15260 269 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SLC16A4O15374 487 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CFLARO15519 480 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 DHHO43323 396 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 FADS1O60427 444 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 GMDSO60547 372 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TOM1O60784 492 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SRP72O76094 671 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TSPAN12O95859 305 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MOCS2O96007 188 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PGK1P00558 417 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 C9P02748 559 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CRHP06850 196 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 HEXAP06865 529 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CHRM4P08173 479 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 HOXB5P09067 269 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 FAM228BP0C875 321 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PET100P0DJ07 73 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PPIAL4FP0DN26 164 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SPP1P10451 314 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ICAM2P13598 275 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ACP5P13686 325 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TCP1P17987 556 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MMP11P24347 488 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 DNASE1P24855 282 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CHRNA5P30532 468 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SSTR1P30872 391 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CDH5P33151 784 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PTGER4P35408 488 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 UGT2B10P36537 528 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MAP3K8P41279 467 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NPBWR2P48146 333 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 GABRA4P48169 554 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ERVS71-1P61550 626 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ESRRGP62508 458 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SIRPAP78324 504 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TFAMQ00059 246 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MYL7Q01449 175 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TNFRSF9Q07011 255 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SIGLEC14Q08ET2 396 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 STX4Q12846 297 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TNK1Q13470 666 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MESDQ14696 234 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PTGES3Q15185 160 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SPA17Q15506 151 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 POU2AF1Q16633 256 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 EXOC3L4Q17RC7 722 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 C6orf226Q5I0X4 101 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MANEALQ5VSG8 457 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 C9orf135Q5VTT2 229 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 IRAK1BP1Q5VVH5 260 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 LYSMD4Q5XG99 296 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ABLIM2Q6H8Q1 611 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NADSYN1Q6IA69 706 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 RPL13AP3Q6NVV1 102 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NIPAL3Q6P499 406 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CBLN3Q6UW01 205 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 USP43Q70EL4 1123 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SLC16A9Q7RTY1 509 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TMED4Q7Z7H5 227 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PRUNE1Q86TP1 453 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ZNF546Q86UE3 836 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 GPBP1Q86WP2 473 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 DHFR2Q86XF0 187 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CATSPERDQ86XM0 798 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PHF13Q86YI8 300 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 OR4N4Q8N0Y3 316 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MARVELD2Q8N4S9 558 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 RBMXL3Q8N7X1 1067 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 AMER3Q8N944 861 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 OR6X1Q8NH79 312 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ACTL9Q8TC94 416 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MARCH1Q8TCQ1 289 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TCEAL3Q969E4 200 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 GLYATL1Q969I3 302 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 YIPF5Q969M3 257 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 ARRDC3Q96B67 414 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PPP1R16AQ96I34 528 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NSL1Q96IY1 281 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NOL4LQ96MY1 436 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 CASD1Q96PB1 797 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TECTBQ96PL2 329 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 RTP3Q9BQQ7 232 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 SEC22CQ9BRL7 303 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TCEAL7Q9BRU2 100 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 TTYH2Q9BSA4 534 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NICN1Q9BSH3 213 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 WRAP53Q9BUR4 548 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 GTPBP2Q9BX10 602 aaKnown RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 WDR54Q9H977 334 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MARCH7Q9H992 704 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 EBF2Q9HAK2 575 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 NMUR1Q9HB89 426 aa3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 RANGRFQ9HD47 186 aaPredicted RBP3.84□□□□□ -1.79
R3HDM1-217ENST00000486532 MYNNQ9NPC7 610 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms