RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SLC22A18ASQ8N1D0 253 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ZCCHC7Q8N3Z6 543 aaKnown RBP2.95□□□□□ -1.94
SMC4-215ENST00000484799 ARL14Q8N4G2 192 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ZNF525Q8N782 197 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 SYT14Q8NB59 555 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ART4Q93070 314 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ADIPOR1Q96A54 375 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ZBTB18Q99592 522 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 TCHPQ9BT92 498 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 TRIM9Q9C026 710 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 CALHM2Q9HA72 323 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 ABCC13Q9NSE7 274 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 SMPD3Q9NY59 655 aaPredicted RBP2.95□□□□□ -1.94
SMC4-215ENST00000484799 SENP1Q9P0U3 644 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 CYTH4Q9UIA0 394 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 RNF115Q9Y4L5 304 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 GMPPBQ9Y5P6 360 aa2.95□□□□□ -1.94
SMC4-215ENST00000484799 KLF18A0A0U1RQI7 1052 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 FOXI3A8MTJ6 420 aaPredicted RBP2.94□□□□□ -1.94
SMC4-215ENST00000484799 C11orf98E9PRG8 122 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CXCL11O14625 94 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 STX11O75558 287 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 OPN1LWP04000 364 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 HCKP08631 526 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CD1EP15812 388 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CA8P35219 290 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 RIPK4P57078 832 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 ERVPABLB-1P60509 514 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CNTN2Q02246 1040 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 NCBP1Q09161 790 aaKnown RBP2.94□□□□□ -1.94
SMC4-215ENST00000484799 EXOC3L2Q2M3D2 409 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 TTC23Q5W5X9 447 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 TMEM225Q6GV28 225 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SCYL2Q6P3W7 929 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 GCNT7Q6ZNI0 430 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 DPY19L4Q7Z388 723 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 TMEM17Q86X19 198 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 ERICH1Q86X53 443 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CCDC71Q8IV32 467 aaPredicted RBP2.94□□□□□ -1.94
SMC4-215ENST00000484799 ZNF679Q8IYX0 411 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 EIF1ADQ8N9N8 165 aaKnown RBP2.94□□□□□ -1.94
SMC4-215ENST00000484799 ZNRF1Q8ND25 227 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 OSTF1Q92882 214 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 EMG1Q92979 244 aaKnown RBP2.94□□□□□ -1.94
SMC4-215ENST00000484799 C7orf34Q96L11 122 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SIGLEC12Q96PQ1 595 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SLC39A3Q9BRY0 314 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 DEFB126Q9BYW3 111 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SLC25A51Q9H1U9 297 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 VCX2Q9H322 139 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 IL1RL2Q9HB29 575 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 ESM1Q9NQ30 184 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 TAS2R16Q9NYV7 291 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CHRNA9Q9UGM1 479 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 CRLS1Q9UJA2 301 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SMC3Q9UQE7 1217 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 GSTK1Q9Y2Q3 226 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 SLCO1B1Q9Y6L6 691 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 KANK1Q14678 1352 aa2.94□□□□□ -1.94
SMC4-215ENST00000484799 ATP10DQ9P241 1426 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 NPIPA7E9PJI5 369 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 UBXN8O00124 270 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 CASKO14936 926 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ZSCAN12O43309 604 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 OR1F1O43749 312 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 DUX1O43812 170 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 H2AFZP0C0S5 128 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 NPIPA8P0DM63 369 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ANXA3P12429 323 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ZNF44P15621 663 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 NT5EP21589 574 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 CEBPDP49716 269 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 HAND2P61296 217 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 NTHL1P78549 312 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ZNF85Q03923 595 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 RAB35Q15286 201 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 UBE2V2Q15819 145 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 RFWD3Q6PCD5 774 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 HACD2Q6Y1H2 254 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 CLDN19Q8N6F1 224 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ANKFN1Q8N957 763 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 ZSCAN4Q8NAM6 433 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 FLVCR1-AS1Q8TAF5 88 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 CTNNBL1Q8WYA6 563 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 SDSLQ96GA7 329 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 DHTKD1Q96HY7 919 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 ZBP1Q9H171 429 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 RNF41Q9H4P4 317 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 GPN2Q9H9Y4 310 aaPredicted RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 APMAPQ9HDC9 416 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 AMBNQ9NP70 447 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 DCAF16Q9NXF7 216 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 MRPL39Q9NYK5 338 aaKnown RBP2.93□□□□□ -1.94
SMC4-215ENST00000484799 AIPL1Q9NZN9 384 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 NPIPA1Q9UND3 350 aa2.93□□□□□ -1.94
SMC4-215ENST00000484799 RPH3ALQ9UNE2 315 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms