RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 POC1BQ8TC44 478 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 EPS8L3Q8TE67 593 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PRRG4Q9BZD6 226 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PIGUQ9H490 435 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SIRT3Q9NTG7 399 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 BAIAP2L1Q9UHR4 511 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 KLF4O43474 513 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 PAX1P15863 534 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 MAPK1P28482 360 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 EIF1P41567 113 aaKnown RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF41P51814 821 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 CTBP2P56545 445 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 POU6F2P78424 691 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 LTBQ06643 244 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 GTF2IRD2BQ6EKJ0 949 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 BEND4Q6ZU67 534 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF550Q7Z398 422 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 GTF2IRD2Q86UP8 949 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 C4orf33Q8N1A6 199 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 RIBC1Q8N443 379 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 BANPQ8N9N5 519 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 B4GALNT2Q8NHY0 566 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 TWIST2Q8WVJ9 160 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 FAM120BQ96EK7 910 aaKnown RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 C16orf58Q96GQ5 468 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 PPP3R2Q96LZ3 170 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 HOXD1Q9GZZ0 328 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 EML4Q9HC35 981 aaKnown RBP10.26□□□□□ -0.77
SCFD1-206ENST00000484733 FBXO34Q9NWN3 711 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 TRAF6Q9Y4K3 522 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 ACTL7BQ9Y614 415 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 MTORP42345 2549 aa10.26□□□□□ -0.77
SCFD1-206ENST00000484733 A0A0J9YW62 118 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 TMEM114B3SHH9 223 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 SCDO00767 359 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 SCAMP2O15127 329 aaKnown RBP10.25□□□□□ -0.77
SCFD1-206ENST00000484733 CXCL13O43927 109 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 THBDP07204 575 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 LINGO3P0C6S8 592 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 NID1P14543 1247 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 ELK4P28324 431 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 ADH6P28332 368 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 SERPINB5P36952 375 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 HPCAL1P37235 193 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 BEX5Q5H9J7 111 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 Q5PR19 223 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 CDC73Q6P1J9 531 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 C22orf34Q6ZV56 151 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 GALNT10Q86SR1 603 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 COX18Q8N8Q8 333 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 CLHC1Q8NHS4 586 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 OR5P2Q8WZ92 322 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 COX4I2Q96KJ9 171 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 RNF145Q96MT1 663 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 KLHL4Q9C0H6 718 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 UBTD1Q9HAC8 227 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 GPR52Q9Y2T5 361 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 LYPLA1O75608 230 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-206ENST00000484733 HEXAP06865 529 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 KRT16P08779 473 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 HPGDP15428 266 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 ADSLP30566 484 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-206ENST00000484733 SUMO3P55854 103 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-206ENST00000484733 XKR7Q5GH72 579 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 STAC2Q6ZMT1 411 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 LRRN4CLQ8ND94 238 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 PPP1R14CQ8TAE6 165 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 CCL19Q99731 98 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 NPAS1Q99742 590 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 BDH2Q9BUT1 245 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 GP6Q9HCN6 339 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 FIS1Q9Y3D6 152 aa10.25□□□□□ -0.77
SCFD1-206ENST00000484733 SMIM23A6NLE4 172 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 PIP5K1BO14986 540 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 GMFGO60234 142 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 PLGP00747 810 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 HMGN2P05204 90 aaKnown RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 CHRNGP07510 517 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 PABPC4LP0CB38 370 aaKnown RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 PSMB1P20618 241 aaKnown RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 NR1H2P55055 460 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 GALNTL6Q49A17 601 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 KLHL26Q53HC5 615 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ARL13AQ5H913 290 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-206ENST00000484733 HBMQ6B0K9 141 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 CLEC9AQ6UXN8 241 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 DDIASQ8IXT1 998 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 GATSQ8NAP1 163 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 OR56A1Q8NGH5 318 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 SFXN5Q8TD22 340 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 OSTF1Q92882 214 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 MOAP1Q96BY2 351 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 COQ8BQ96D53 544 aa10.24□□□□□ -0.77
SCFD1-206ENST00000484733 ARSGQ96EG1 525 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms