RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OLIG3Q7RTU3 272 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 PM20D2Q8IYS1 436 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 ZNF619Q8N2I2 560 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 ANKFN1Q8N957 763 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 B4GALNT2Q8NHY0 566 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 C10orf82Q8WW14 230 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 PMM1Q92871 262 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 SH3YL1Q96HL8 342 aaPredicted RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 SFXN2Q96NB2 322 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 UGT2B28Q9BY64 529 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 NSRP1Q9H0G5 558 aaKnown RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 ALKBH4Q9NXW9 302 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 P2RX2Q9UBL9 471 aa18.98■□□□□ 0.63
SEC13-217ENST00000482647 RPH3AQ9Y2J0 694 aaPredicted RBP18.98■□□□□ 0.63
SEC13-217ENST00000482647 A0A087WZY1 265 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 TMEM247A6NEH6 219 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 SERINC4A6NH21 518 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 GMFGO60234 142 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 KIAA0513O60268 411 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 WDR1O75083 606 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 UGT2B17O75795 530 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 ZIC2O95409 532 aaPredicted RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 GABRA1P14867 456 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 TCEA1P23193 301 aaKnown RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 CHMP24386 653 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 ACVR2AP27037 513 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 ADSLP30566 484 aaPredicted RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 GFRA1P56159 465 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 GNGT1P63211 74 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 CHRNEQ04844 493 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 FADDQ13158 208 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 GNA13Q14344 377 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 RGNQ15493 299 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 TMEM211Q6ICI0 200 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 ENPP6Q6UWR7 440 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 FRRS1Q6ZNA5 592 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 LRRC74BQ6ZQY2 392 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 SPATA21Q7Z572 469 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 CPLX4Q7Z7G2 160 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 DPP10Q8N608 796 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 CCDC120Q96HB5 630 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 ELAC2Q9BQ52 826 aaKnown RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 MTHFD2LQ9H903 347 aaPredicted RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 CALML5Q9NZT1 146 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 VAPAQ9P0L0 249 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.97■□□□□ 0.63
SEC13-217ENST00000482647 KCNE5Q9UJ90 142 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 GMEB1Q9Y692 573 aa18.97■□□□□ 0.63
SEC13-217ENST00000482647 DNAJC13O75165 2243 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 EVPLLA8MZ36 301 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 AHRRA9YTQ3 701 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 FAM47E-STBD1D6RA91 191 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 LINC01387J3KSC0 135 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 CCDC22O60826 627 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 TFPTP0C1Z6 253 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 PTGER4P35408 488 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 RNF144AP50876 292 aaPredicted RBP18.96■□□□□ 0.63
SEC13-217ENST00000482647 KLF10Q13118 480 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 SF3B4Q15427 424 aaKnown RBP eCLIP18.96■□□□□ 0.633e-7■■□□□ 13.7
SEC13-217ENST00000482647 MAPRE2Q15555 327 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 RAET1LQ5VY80 246 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 ARSKQ6UWY0 536 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 DLEU7Q6UYE1 221 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 RPTNQ6XPR3 784 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 EIF3MQ7L2H7 374 aaKnown RBP18.96■□□□□ 0.63
SEC13-217ENST00000482647 MSRB3Q8IXL7 192 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 PHF10Q8WUB8 498 aaKnown RBP18.96■□□□□ 0.63
SEC13-217ENST00000482647 DMRTA2Q96SC8 542 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 FAM107BQ9H098 131 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 CORO2BQ9UQ03 480 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 CARD8Q9Y2G2 431 aa18.96■□□□□ 0.63
SEC13-217ENST00000482647 TRBV5-3A0A0A0MS03 114 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 SLC22A2O15244 555 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ZNF264O43296 627 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 EIF4E2O60573 245 aaKnown RBP18.95■□□□□ 0.62
SEC13-217ENST00000482647 ZG16O60844 167 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 TNFRSF21O75509 655 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 CHRM4P08173 479 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 UBL4AP11441 157 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 CPN1P15169 458 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ADH7P40394 386 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ZNF41P51814 821 aaPredicted RBP18.95■□□□□ 0.62
SEC13-217ENST00000482647 SMSP52788 366 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 SUMO3P55854 103 aaPredicted RBP18.95■□□□□ 0.62
SEC13-217ENST00000482647 B3GALT5-AS1P59052 145 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ZNF117Q03924 483 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 MAPK14Q16539 360 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 DHDDSQ86SQ9 333 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 RETREG3Q86VR2 466 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ULK2Q8IYT8 1036 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 SLC38A5Q8WUX1 472 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ZG16BQ96DA0 208 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 WDYHV1Q96HA8 205 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 PIGQQ9BRB3 760 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 PRDM14Q9GZV8 571 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 SLC38A1Q9H2H9 487 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 ICAM5Q9UMF0 924 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 CAMK2AQ9UQM7 478 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 GTF3C1Q12789 2109 aa18.95■□□□□ 0.62
SEC13-217ENST00000482647 RNF224P0DH78 156 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms