RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 EXOSC6Q5RKV6 272 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 GTPBP8Q8N3Z3 284 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 GATSQ8NAP1 163 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 B4GALNT2Q8NHY0 566 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 FAM120BQ96EK7 910 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 BTBD2Q9BX70 525 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 HOXD1Q9GZZ0 328 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 PIGUQ9H490 435 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 FANCFQ9NPI8 374 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 DUSP22Q9NRW4 184 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 BEX4Q9NWD9 120 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 KLHL28Q9NXS3 571 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 C6orf203Q9P0P8 240 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 SNX8Q9Y5X2 465 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 AQP8O94778 261 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 SYNGR4O95473 234 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 LAMP1P11279 417 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 CD53P19397 219 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 ATP6V1C1P21283 382 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 ME2P23368 584 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 PRRC2AP48634 2157 aaKnown RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 CTBP2P56545 445 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 XKR7Q5GH72 579 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 C6orf136Q5SQH8 315 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 CCNJQ5T5M9 372 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 ESPNLQ6ZVH7 1005 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 MTERF4Q7Z6M4 381 aaKnown RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 GGNQ86UU5 652 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 OR7A2PQ8NGA2 310 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 OR5P2Q8WZ92 322 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 GMPPAQ96IJ6 420 aaPredicted RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 GLRX2Q9NS18 164 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 MED17Q9NVC6 651 aa12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.487e-6■■□□□ 11.8
CTDSP1-208ENST00000482272 FAF1Q9UNN5 650 aaPredicted RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 V9GYY5 206 aaPredicted RBP12.07□□□□□ -0.48
CTDSP1-208ENST00000482272 C7orf72A4D263 438 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 H3BNH8 94 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ADAMDEC1O15204 470 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 CFLARO15519 480 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 OPN1LWP04000 364 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 KRT16P08779 473 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 IL11P20809 199 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 PRPS1L1P21108 318 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 CRYGSP22914 178 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 MAD2L1Q13257 205 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 LASP1Q14847 261 aaKnown RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 PTGR1Q14914 329 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 GUSBP1Q15486 140 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 PLPPR5Q32ZL2 321 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 SPDYE7PQ495Y7 208 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 CDC73Q6P1J9 531 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 FNDC5Q8NAU1 212 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ZNF527Q8NB42 609 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 OR56A1Q8NGH5 318 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 OR10D3Q8NH80 312 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 PHOSPHO1Q8TCT1 267 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 CDS1Q92903 461 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 PIGTQ969N2 578 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 MOAP1Q96BY2 351 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 COQ8BQ96D53 544 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 SH3YL1Q96HL8 342 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 C1orf50Q9BV19 199 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ACTRT3Q9BYD9 372 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ZDHHC2Q9UIJ5 367 aa12.06□□□□□ -0.48
CTDSP1-208ENST00000482272 ANKHD1Q8IWZ3 2542 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 SPG11Q96JI7 2443 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 ARHGEF9O43307 516 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 TYROBPO43914 113 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 CXCL13O43927 109 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 NUDT14O95848 222 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 BPGMP07738 259 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 PABPC4LP0CB38 370 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 PPP3CBP16298 524 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 FPR1P21462 350 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 PSMA4P25789 261 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 HOXC12P31275 282 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 ETV4P43268 484 aa12.05□□□□□ -0.48
CTDSP1-208ENST00000482272 RNF144AP50876 292 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms