RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 BCL3P20749 454 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ASMTP46597 345 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 RABIFP47224 123 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 IST1P53990 364 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 GMFBP60983 142 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 NUCB2P80303 420 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 HMGN5P82970 282 aaKnown RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 NAAAQ02083 359 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 PDIA5Q14554 519 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 SLC10A1Q14973 349 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ZKSCAN8Q15776 578 aaPredicted RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 ZNF699Q32M78 642 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ACSF3Q4G176 576 aaPredicted RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 SLC25A30Q5SVS4 291 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 BEND6Q5SZJ8 279 aaPredicted RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 SEL1L2Q5TEA6 688 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 RNLSQ5VYX0 342 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 IRGCQ6NXR0 463 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ADAMTSL5Q6ZMM2 481 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ADCK1Q86TW2 530 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 APOBEC3FQ8IUX4 373 aaKnown RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 RNF148Q8N7C7 305 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 GPATCH11Q8N954 259 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 FAM184AQ8NB25 1140 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ANKRD20A12PQ8NF67 263 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 OR4F17Q8NGA8 305 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 OR56B1Q8NGI3 324 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 DQX1Q8TE96 717 aaKnown RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 C14orf79Q96F83 325 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 SAMD8Q96LT4 415 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 OR4F4Q96R69 305 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 WRAP53Q9BUR4 548 aaKnown RBP2.96□□□□□ -1.94
CBX3-207ENST00000481300 DEFB129Q9H1M3 183 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 STARD5Q9NSY2 213 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 GDAP2Q9NXN4 497 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 GPR83Q9NYM4 423 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 NINJ2Q9NZG7 142 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 PLEKHA6Q9Y2H5 1048 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 SMAD5-AS1Q9Y6J3 95 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 BCORQ6W2J9 1755 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 CNTNAP1P78357 1384 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 UBR3Q6ZT12 1888 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 ROBO3Q96MS0 1386 aa2.96□□□□□ -1.94
CBX3-207ENST00000481300 DUOX1Q9NRD9 1551 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RGPD3A6NKT7 1758 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 RGPD4Q7Z3J3 1758 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 N4BP2Q86UW6 1770 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 IGKV6D-41A0A0C4DH26 115 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 VPS37CA5D8V6 355 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 ZSCAN5CA6NGD5 496 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 EFCAB7A8K855 629 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 H3BMH7 237 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 H3BQV1 296 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 LGALS8O00214 317 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 ADAM12O43184 909 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 BCL2L11O43521 198 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 TYROBPO43914 113 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 SRPX2O60687 465 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 ZNF253O75346 499 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 IGSF6O95976 241 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 PVRP15151 417 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 CYP11B1P15538 503 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 SYT1P21579 422 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 KIF5BP33176 963 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 EPHX2P34913 555 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RFC2P35250 354 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 IL1RL1Q01638 556 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 ZNF85Q03923 595 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 GABPB1Q06547 395 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 PEX6Q13608 980 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RUNX3Q13761 415 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 KARSQ15046 597 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 ZNF239Q16600 458 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 MS4A13Q5J8X5 152 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 LDLRAP1Q5SW96 308 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RAET1GQ6H3X3 334 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 ZNF600Q6ZNG1 722 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 TMEM179Q6ZVK1 233 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 USP50Q70EL3 339 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 MARCH9Q86YJ5 346 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 HPS6Q86YV9 775 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RFESDQ8TAC1 157 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 VN1R17PQ8TDU5 208 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 PIBF1Q8WXW3 757 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 DLX4Q92988 240 aaPredicted RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 NCLNQ969V3 563 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 DCPSQ96C86 337 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 KCNK16Q96T55 309 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 LZTS2Q9BRK4 669 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 CARD6Q9BX69 1037 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RBM28Q9NW13 759 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 IMPAD1Q9NX62 359 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 NYAP2Q9P242 653 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 PRODH2Q9UF12 536 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 RSPH14Q9UHP6 348 aa2.95□□□□□ -1.94
CBX3-207ENST00000481300 ISY1Q9ULR0 285 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.95□□□□□ -1.94
CBX3-207ENST00000481300 DDX60Q8IY21 1712 aaKnown RBP2.94□□□□□ -1.94
CBX3-207ENST00000481300 NRXN2Q9P2S2 1712 aa2.94□□□□□ -1.94
CBX3-207ENST00000481300 NUP98P52948 1817 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms