RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SH3D21A4FU49 640 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 SLCO1B7G3V0H7 640 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 TNFSF13O75888 250 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 SMNDC1O75940 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCM2-213ENST00000480658 SYNGR4O95473 234 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 GUSBP08236 651 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ACP2P11117 423 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
CCM2-213ENST00000480658 KCNJ5P48544 419 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 STARP49675 285 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 CTBP2P56545 445 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 WNT3P56703 355 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ABCE1P61221 599 aaKnown RBP10.32□□□□□ -0.76
CCM2-213ENST00000480658 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 PON3Q15166 354 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 CHI3L2Q15782 390 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 PRSS53Q2L4Q9 553 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 TMEM44Q2T9K0 475 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ZNF385BQ569K4 471 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 EXOSC6Q5RKV6 272 aaKnown RBP10.32□□□□□ -0.76
CCM2-213ENST00000480658 DCST2Q5T1A1 773 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ATAD3BQ5T9A4 648 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 PAMR1Q6UXH9 720 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 SSX8Q7RTT4 187 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 GCNT2Q8N0V5 402 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 OR6K3Q8NGY3 331 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 CPNE4Q96A23 557 aaPredicted RBP10.32□□□□□ -0.76
CCM2-213ENST00000480658 TESCQ96BS2 214 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 C1orf50Q9BV19 199 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 NMUR2Q9GZQ4 415 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 CXXC4Q9H2H0 198 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 POLE3Q9NRF9 147 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ZDHHC2Q9UIJ5 367 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 HAO1Q9UJM8 370 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 PRDM4Q9UKN5 801 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 PROCRQ9UNN8 238 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 VDAC3Q9Y277 283 aa10.32□□□□□ -0.76
CCM2-213ENST00000480658 ANKHD1Q8IWZ3 2542 aaKnown RBP10.32□□□□□ -0.76
CCM2-213ENST00000480658 TACC2O95359 2948 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 NINQ8N4C6 2090 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 GXYLT2A0PJZ3 443 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 TRPC5OSA6NMA1 111 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 EIF1AYO14602 144 aaKnown RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 ADAMDEC1O15204 470 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 EIF4E2O60573 245 aaKnown RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 NME6O75414 186 aaPredicted RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 STX11O75558 287 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 NUDT14O95848 222 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 LAMP1P11279 417 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 POU2F1P14859 743 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 SOAT1P35610 550 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CD79BP40259 229 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 MAGEA8P43361 318 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 EIF1AXP47813 144 aaKnown RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 P2RX1P51575 399 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 SLC18A1P54219 525 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 ATP12AP54707 1039 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CLDN15P56746 228 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 HPCAP84074 193 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CBFBQ13951 182 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 KEAP1Q14145 624 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 RNPS1Q15287 305 aaKnown RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 PLPPR5Q32ZL2 321 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CEP85LQ5SZL2 805 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 FIGNL1Q6PIW4 674 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 BEND4Q6ZU67 534 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CDC20BQ86Y33 519 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 RIMKLAQ8IXN7 391 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 OR7A2PQ8NGA2 310 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 OR4C3Q8NH37 302 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 PHOSPHO1Q8TCT1 267 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 MRGPRX4Q96LA9 322 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 MED18Q9BUE0 208 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 PARD6BQ9BYG5 372 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 DPY30Q9C005 99 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 OR10A4Q9H209 315 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 CENPHQ9H3R5 247 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 SIRT3Q9NTG7 399 aaPredicted RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 MED17Q9NVC6 651 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 TESMINQ9Y4I5 508 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 DTNAQ9Y4J8 743 aa10.31□□□□□ -0.76
CCM2-213ENST00000480658 SPIN1Q9Y657 262 aaPredicted RBP10.31□□□□□ -0.76
CCM2-213ENST00000480658 PRSS51A0A1B0GVH4 220 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 KDM4EB2RXH2 506 aaPredicted RBP10.3□□□□□ -0.76
CCM2-213ENST00000480658 C16orf97H3BN30 126 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 GTPBP1O00178 669 aaKnown RBP10.3□□□□□ -0.76
CCM2-213ENST00000480658 SS18L1O75177 396 aaPredicted RBP10.3□□□□□ -0.76
CCM2-213ENST00000480658 TGM6O95932 706 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 IGKV1D-16P01601 117 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 DHRS4L1P0CG22 281 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 G6PDP11413 515 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 IL11P20809 199 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 SLC1A6P48664 564 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 FOXF2Q12947 444 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 SELENBP1Q13228 472 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 STX3Q13277 289 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 PDCD2Q16342 344 aaPredicted RBP10.3□□□□□ -0.76
CCM2-213ENST00000480658 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
CCM2-213ENST00000480658 FAM219BQ5XKK7 198 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms