RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SDHAF3Q9NRP4 125 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 C20orf96Q9NUD7 363 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 AURKAIP1Q9NWT8 199 aaPredicted RBP10.28□□□□□ -0.76
USP11-208ENST00000480104 TFR2Q9UP52 801 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 DNAH7Q8WXX0 4024 aa10.28□□□□□ -0.76
USP11-208ENST00000480104 IGHV3-15A0A0B4J1V0 119 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 PLPP2O43688 288 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 LIASO43766 372 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 MTHFD2P13995 350 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 PCSK2P16519 638 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 SELEP16581 610 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 GGT5P36269 586 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 FEN1P39748 380 aaKnown RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 MRPS22P82650 360 aaKnown RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 MYBPC1Q00872 1141 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 LAPTM5Q13571 262 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 DDX39BQ13838 428 aaKnown RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 LTB4RQ15722 352 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 TRMT12Q53H54 448 aaKnown RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 CYP20A1Q6UW02 462 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 MARCH3Q86UD3 253 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 CCDC89Q8N998 374 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 OR4N2Q8NGD1 307 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 DNAJC7Q99615 494 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 PSD2Q9BQI7 771 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 CENPKQ9BS16 269 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 TMEM79Q9BSE2 394 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 GATA5Q9BWX5 397 aaPredicted RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 C7orf69Q9H7B7 122 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 TESQ9UGI8 421 aaKnown RBP10.27□□□□□ -0.77
USP11-208ENST00000480104 ABCG2Q9UNQ0 655 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 OARD1Q9Y530 152 aa10.27□□□□□ -0.77
USP11-208ENST00000480104 IGLV3-32A0A0A0MS00 114 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 TCRBV7S3A2A0A539 114 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 NCF1BA6NI72 391 aaPredicted RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 NCF1CA8MVU1 366 aaPredicted RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 hCG_2039718K7EN88 272 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 GBAP04062 536 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ATP1B1P05026 303 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 NCF1P14598 390 aaPredicted RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 EPORP19235 508 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ENPP1P22413 925 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 GABRB3P28472 473 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 SLC1A3P43003 542 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 MRPS35P82673 323 aaKnown RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 SARNPP82979 210 aaKnown RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 IRF8Q02556 426 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 CHIT1Q13231 466 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 HLXQ14774 488 aaPredicted RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 ADRM1Q16186 407 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 HSP90AA5PQ58FG0 334 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ACSM5Q6NUN0 579 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 SYT10Q6XYQ8 523 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 LMNTD2Q8IXW0 634 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ZNF100Q8IYN0 542 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 OR7G3Q8NG95 312 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 CALML6Q8TD86 181 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 GBP4Q96PP9 640 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ZNF300Q96RE9 604 aaPredicted RBP10.26□□□□□ -0.77
USP11-208ENST00000480104 GPA33Q99795 319 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 TPK1Q9H3S4 243 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ANKRA2Q9H9E1 313 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 PLAC1Q9HBJ0 212 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 TIGARQ9NQ88 270 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 KLHL9Q9P2J3 617 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 ICAM5Q9UMF0 924 aa10.26□□□□□ -0.77
USP11-208ENST00000480104 KLF11O14901 512 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 RGS14O43566 566 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ANPEPP15144 967 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 SERPINB1P30740 379 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 BSGP35613 385 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 MANFP55145 182 aaKnown RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 FOXG1P55316 489 aaPredicted RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 CSTF3Q12996 717 aaKnown RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 GABRA6Q16445 453 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 PDK4Q16654 411 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ZNF311Q5JNZ3 666 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ELFN2Q5R3F8 820 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ZNF362Q5T0B9 420 aaPredicted RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 MED27Q6P2C8 311 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 C16orf87Q6PH81 154 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 FRA10AC1Q70Z53 315 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 SLC44A2Q8IWA5 706 aaPredicted RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 LAS2Q8IYD9 372 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 LILRA2Q8N149 483 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 UBE2J2Q8N2K1 259 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 NOA1Q8NC60 698 aaKnown RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 C2CD4AQ8NCU7 369 aaPredicted RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 SLC9A6Q92581 669 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ESAMQ96AP7 390 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 PDLIM5Q96HC4 596 aaKnown RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 VSTM2LQ96N03 204 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 KCNF1Q9H3M0 494 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 ZNF665Q9H7R5 613 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 DDX31Q9H8H2 851 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms