RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	HSPB3	Q12988	150 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	TP53BP2	Q13625	1128 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF628	Q5EBL2	1059 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	EEF1A1P5	Q5VTE0	462 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	OR4F3	Q6IEY1	312 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	SLC15A4	Q8N697	577 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	C17orf47	Q8NEP4	570 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	OR9A2	Q8NGT5	310 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	NUBPL	Q8TB37	319 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	SFXN5	Q8TD22	340 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	BCAS4	Q8TDM0	211 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	TP53INP1	Q96A56	240 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	CIDEC	Q96AQ7	238 aa	Predicted RBP	14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	CMTM5	Q96DZ9	223 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	SPDL1	Q96EA4	605 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	LRRC37B	Q96QE4	947 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	PANX1	Q96RD7	426 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	OR10A5	Q9H207	317 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	PIGM	Q9H3S5	423 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF385D	Q9H6B1	395 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	MAT2B	Q9NZL9	334 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	BCAP29	Q9UHQ4	241 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	C19orf53	Q9UNZ5	99 aa	Predicted RBP	14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	CAMK2A	Q9UQM7	478 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	ERVK-19	Q9WJR5	959 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894	NDUFAF1	Q9Y375	327 aa		14.11	□□□□□ -0.15
HDLBP-238	ENST00000479894		A0A1W2PP18	115 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	NR5A2	O00482	541 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	RFXANK	O14593	260 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	ANP32D	O95626	131 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	NPPA	P01160	153 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	IGKV3-11	P04433	115 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	TP53	P04637	393 aa	Predicted RBP	14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	GDF1	P27539	372 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	TNK1	Q13470	666 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	CHRFAM7A	Q494W8	412 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF385B	Q569K4	471 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	COQ5	Q5HYK3	327 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	LUZP2	Q86TE4	346 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	MTDH	Q86UE4	582 aa	Known RBP	14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	TAGAP	Q8N103	731 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	OR2L13	Q8N349	312 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF441	Q8N8Z8	693 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	C9orf106	Q8NAJ2	232 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	PCYOX1L	Q8NBM8	494 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	OR4A15	Q8NGL6	344 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	SLC22A8	Q8TCC7	542 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF721	Q8TF20	911 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	SPACA9	Q96E40	222 aa	Predicted RBP	14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	NTM	Q9P121	344 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF639	Q9UID6	485 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	LEF1	Q9UJU2	399 aa	Predicted RBP	14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	SNX8	Q9Y5X2	465 aa		14.1	□□□□□ -0.15
HDLBP-238	ENST00000479894	DUXA	A6NLW8	204 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	CAPN14	A8MX76	684 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894		A8MXE2	369 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	CD5L	O43866	347 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	KRT75	O95678	551 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	C6orf47	O95873	294 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	AGR2	O95994	175 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	HPN	P05981	417 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	UQCRC2	P22695	453 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	CRYGS	P22914	178 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	PPIB	P23284	216 aa	Known RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	CCT3	P49368	545 aa	Known RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	PRIM2	P49643	509 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MNAT1	P51948	309 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	NRG3	P56975	720 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MGAT2	Q10469	447 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	KLF10	Q13118	480 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MMEL1	Q495T6	779 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	TIGD2	Q4W5G0	525 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	TBCEL	Q5QJ74	424 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	PRAMEF20	Q5VT98	475 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	TMEM107	Q6UX40	140 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	PLEKHM3	Q6ZWE6	761 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZNF551	Q7Z340	670 aa	Predicted RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	ADCY4	Q8NFM4	1077 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	RP9	Q8TA86	221 aa	Known RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	ZPLD1	Q8TCW7	415 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	PIK3IP1	Q96FE7	263 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	WDYHV1	Q96HA8	205 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	TEX37	Q96LM6	180 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MS4A4E	Q96PG1	132 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	RAD21L1	Q9H4I0	556 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	CXorf56	Q9H5V9	222 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MRTO4	Q9UKD2	239 aa	Known RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	FAF1	Q9UNN5	650 aa	Predicted RBP	14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	EXPH5	Q8NEV8	1989 aa		14.09	□□□□□ -0.15
HDLBP-238	ENST00000479894	MYOCOS	A0A1B0GUC4	107 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	C2orf92	A0A1B0GVN3	265 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	ANKRD33B	A6NCL7	494 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	ACOX3	O15254	700 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	RCBTB2	O95199	551 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	KCNH1	O95259	989 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	CPSF4	O95639	269 aa	Known RBP	14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	ZCCHC18	P0CG32	403 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	FAM157C	P0CG43	387 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	NID1	P14543	1247 aa		14.08	□□□□□ -0.16
HDLBP-238	ENST00000479894	IL12A	P29459	219 aa		14.08	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms