RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMEM233B4DJY2 109 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 H3BML4 177 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 PIP5K1BO14986 540 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 GMFGO60234 142 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 TNFSF13O75888 250 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 ATP5HO75947 161 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 NKX2-2O95096 273 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 ANGPTL1O95841 491 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 CRHP06850 196 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 DDX5P17844 614 aaKnown RBP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 IDH3AP50213 366 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 PRR5P85299 388 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 C17orf67Q0P5P2 114 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 GRAMD1BQ3KR37 738 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 FAM91A1Q658Y4 838 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 EPGNQ6UW88 154 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 MAVSQ7Z434 540 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 GALNT10Q86SR1 603 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 CNEP1R1Q8N9A8 125 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 OR5M1Q8NGP8 315 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 FBXO30Q8TB52 745 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 SMPDL3BQ92485 455 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 HOXB13Q92826 284 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 MTERF3Q96E29 417 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 DACH2Q96NX9 599 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 PINK1Q9BXM7 581 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 ACSS1Q9NUB1 689 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 BAIAP2L1Q9UHR4 511 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 RRP15Q9Y3B9 282 aaKnown RBP12.93□□□□□ -0.34
ATG4B-218ENST00000479554 ZNF337Q9Y3M9 751 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 IGLV3-32A0A0A0MS00 114 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 A8MXE2 369 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 H0YC42 278 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 MSTNO14793 375 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 EMC8O43402 210 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 DIAPH2O60879 1101 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 OXSR1O95747 527 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 FGF4P08620 206 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 ACP2P11117 423 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 MAPK1P28482 360 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 HPCAL1P37235 193 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 MAP3K8P41279 467 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 TPD52P55327 224 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 BNIP1Q12981 228 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 POU4F3Q15319 338 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 GLYR1Q49A26 553 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 AGR3Q8TD06 166 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 FIG4Q92562 907 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 ALPK1Q96QP1 1244 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 HHATLQ9HCP6 504 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 SAR1AQ9NR31 198 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 NTMQ9P121 344 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 ZNF175Q9Y473 711 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 TRAF6Q9Y4K3 522 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 SETD2Q9BYW2 2564 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 MED12LQ86YW9 2145 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 ZFHX3Q15911 3703 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 C2CD3Q4AC94 2353 aa12.92□□□□□ -0.34
ATG4B-218ENST00000479554 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-218ENST00000479554 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 ALG1L2C9J202 215 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 SCAMP2O15127 329 aaKnown RBP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 NDUFB5O43674 189 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 RAF1P04049 648 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 NGFRP08138 427 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 BCKDHAP12694 445 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CD99P14209 185 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 RPL3P39023 403 aaKnown RBP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 SUCLG1P53597 346 aaKnown RBP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CLDN15P56746 228 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CLDN20P56880 219 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 SIRPAP78324 504 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 KRT72Q14CN4 511 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 PON3Q15166 354 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATG4B-218ENST00000479554 MFSD12Q6NUT3 480 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 VWA1Q6PCB0 445 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CAMKMTQ7Z624 323 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 COX18Q8N8Q8 333 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 SLC16A11Q8NCK7 471 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 FNDC9Q8TBE3 224 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 JADE3Q92613 823 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 PPP3R2Q96LZ3 170 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 CCDC28BQ9BUN5 200 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 NDRG3Q9UGV2 375 aa12.91□□□□□ -0.34
ATG4B-218ENST00000479554 VDAC3Q9Y277 283 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms