RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 KLHL13Q9P2N7 655 aa15.23■□□□□ 0.03
VIM-204ENST00000478746 MALRD1Q5VYJ5 2156 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 GXYLT2A0PJZ3 443 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ABCD4O14678 606 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 WIPF1O43516 503 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 PRKD3O94806 890 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 SLITRK5O94991 958 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 KCNH1O95259 989 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 IGKV1D-16P01601 117 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 KRT6AP02538 564 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 KRT6BP04259 564 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 YES1P07947 543 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 RPS17P08708 135 aaKnown RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF16P17020 682 aaPredicted RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 KRT6CP48668 564 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 PLTPP55058 493 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ACSM2AQ08AH3 577 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 PPA1Q15181 289 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 STK11Q15831 433 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF239Q16600 458 aaKnown RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 PLPPR5Q32ZL2 321 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 TCHHL1Q5QJ38 904 aaPredicted RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 LIPNQ5VXI9 398 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ACSM2BQ68CK6 577 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 TRABD2AQ86V40 505 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 OR2L13Q8N349 312 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF525Q8N782 197 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ACTRT2Q8TDY3 377 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF483Q8TF39 744 aaPredicted RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 FAM168AQ92567 244 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 HTRA1Q92743 480 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 PROX1Q92786 737 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 RADILQ96JH8 1075 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 LMF2Q9BU23 707 aaKnown RBP15.22■□□□□ 0.03
VIM-204ENST00000478746 GP6Q9HCN6 339 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 CBLN4Q9NTU7 201 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF225Q9UK10 706 aa15.22■□□□□ 0.03
VIM-204ENST00000478746 ZNF814B7Z6K7 855 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 ALG1L2C9J202 215 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 ULK1O75385 1050 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 PSMG1O95456 288 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 USF1P22415 310 aaPredicted RBP15.21■□□□□ 0.03
VIM-204ENST00000478746 TTKP33981 857 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 SFTPDP35247 375 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 LSM11P83369 360 aaKnown RBP eCLIP15.21■□□□□ 0.03
VIM-204ENST00000478746 SLC18A2Q05940 514 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 C2orf80Q0P641 193 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 PRSS53Q2L4Q9 553 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 SPIN4Q56A73 249 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 C11orf71Q6IPW1 123 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 Q6ZSR9 355 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 IL17RELQ6ZVW7 336 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 TDRPQ86YL5 185 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 GATSQ8NAP1 163 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 OR4C3Q8NH37 302 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 POC1BQ8TC44 478 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 CPNE4Q96A23 557 aaPredicted RBP15.21■□□□□ 0.03
VIM-204ENST00000478746 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 APIPQ96GX9 242 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 KCNS2Q9ULS6 477 aa15.21■□□□□ 0.03
VIM-204ENST00000478746 PLCE1Q9P212 2302 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 TTC36A6NLP5 189 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 RAD51CO43502 376 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 LYZL6O75951 148 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 OXSR1O95747 527 aaPredicted RBP15.2■□□□□ 0.02
VIM-204ENST00000478746 ANXA4P09525 319 aaPredicted RBP15.2■□□□□ 0.02
VIM-204ENST00000478746 DDCP20711 480 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 IGFBP5P24593 272 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 TIA1P31483 386 aaKnown RBP eCLIP15.2■□□□□ 0.02
VIM-204ENST00000478746 HSD17B3P37058 310 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 GZMKP49863 264 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 MANFP55145 182 aaKnown RBP15.2■□□□□ 0.02
VIM-204ENST00000478746 CAV1Q03135 178 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 BTKQ06187 659 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 FAM120AOSQ5T036 256 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 FAM166AQ6J272 317 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 Q6ZT83 130 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 FCRLAQ7L513 359 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 FBXL14Q8N1E6 418 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
VIM-204ENST00000478746 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 GPR151Q8TDV0 419 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 C10orf105Q8TEF2 133 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 PIK3R3Q92569 461 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 SH3YL1Q96HL8 342 aaPredicted RBP15.2■□□□□ 0.02
VIM-204ENST00000478746 DHRS9Q9BPW9 319 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 EBPLQ9BY08 206 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 SRXN1Q9BYN0 137 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 ACPTQ9BZG2 426 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 GLIPR2Q9H4G4 154 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 CHODLQ9H9P2 273 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 GRID1Q9ULK0 1009 aa15.2■□□□□ 0.02
VIM-204ENST00000478746 SVEP1Q4LDE5 3571 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 E7EQL1 145 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 SHC1P29353 583 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 NTSP30990 170 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 GSTM5P46439 218 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 CLCQ05315 142 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms