RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 KIAA0513O60268 411 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CDC40O60508 579 aaKnown RBP eCLIP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ADAM11O75078 769 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 FZD7O75084 574 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CBR3O75828 277 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TNFSF13O75888 250 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ACTL6AO96019 429 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TPOP07202 933 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 LINGO3P0C6S8 592 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ABOP16442 354 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 GDF1P27539 372 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PTGER4P35408 488 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 RPL3P39023 403 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SUCLG1P53597 346 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 KCNJ2P63252 427 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 RPP38P78345 283 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ZNF141Q15928 474 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 BCL2A1Q16548 175 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PLPPR5Q32ZL2 321 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 GLYR1Q49A26 553 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SPANXN4Q5MJ08 99 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 C6orf163Q5TEZ5 329 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 HLA-DQA1Q5Y7H0 255 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TMEM198Q66K66 360 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PLXDC2Q6UX71 529 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 YRDCQ86U90 279 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 MARCH3Q86UD3 253 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 FUNDC1Q8IVP5 155 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 METTL25Q8N6Q8 603 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ANKRD42Q8N9B4 389 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OR1J4Q8NGS1 313 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ZFP28Q8NHY6 868 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CDC26Q8NHZ8 85 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TUBGCP3Q96CW5 907 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 NEURL3Q96EH8 262 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OTUB1Q96FW1 271 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OR7D2Q96RA2 312 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 INPP5KQ9BT40 448 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 BTBD2Q9BX70 525 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ACTRT3Q9BYD9 372 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 NMUR2Q9GZQ4 415 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 NPHS2Q9NP85 383 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SLCO1B3Q9NPD5 702 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SDR39U1Q9NRG7 319 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 DDX18Q9NVP1 670 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SH3BGRL2Q9UJC5 107 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ICAM5Q9UMF0 924 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CHST2Q9Y4C5 530 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TACC2O95359 2948 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PRRG2O14669 202 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CGAP01215 116 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 HOXD4P09016 255 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ZNF17P17021 662 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 LBPP18428 481 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 IL11P20809 199 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 HTR1EP28566 365 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 EPHA3P29320 983 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CHRNB4P30926 498 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 GABRA3P34903 492 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PCYT1AP49585 367 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PRIM2P49643 509 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 DSCR4P56555 118 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ZNF117Q03924 483 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 MAD2L1Q13257 205 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 GANABQ14697 944 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ARHGAP11BQ3KRB8 267 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CCNJQ5T5M9 372 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CPTPQ5TA50 214 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SP5Q6BEB4 398 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TYW3Q6IPR3 259 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ARSKQ6UWY0 536 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 FRRS1Q6ZNA5 592 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OLIG3Q7RTU3 272 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SPATA19Q7Z5L4 167 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 LACC1Q8IV20 430 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CCDC71Q8IV32 467 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OR56A1Q8NGH5 318 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OR5D16Q8NGK9 328 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 FBXO30Q8TB52 745 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 MOAP1Q96BY2 351 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SARAFQ96BY9 339 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 TMCO6Q96DC7 493 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 ARSGQ96EG1 525 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 RMND5BQ96G75 393 aaPredicted RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 MARK4Q96L34 752 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 PPP1R36Q96LQ0 422 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 METTL7AQ9H8H3 244 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 MANSC1Q9H8J5 431 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 CALHM2Q9HA72 323 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 Q9N2J8 555 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 SUCOQ9UBS9 1254 aaKnown RBP3.82□□□□□ -1.8
POLR2B-208ENST00000478188 L3MBTL1Q9Y468 752 aa3.82□□□□□ -1.8
POLR2B-208ENST00000478188 OR2M5A3KFT3 312 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 NKX2-6A6NCS4 301 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 AHRRA9YTQ3 701 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 C9JVG2 144 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 H0YC42 278 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 HMGN4O00479 90 aa3.81□□□□□ -1.8
POLR2B-208ENST00000478188 ERLIN1O75477 346 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms