RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 NT5C3BQ969T7 300 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 AP2M1Q96CW1 435 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 COX14Q96I36 57 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 C19orf24Q9BVV8 132 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 PANK2Q9BZ23 570 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 PLA2G12AQ9BZM1 189 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 CARD9Q9H257 536 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 CCDC68Q9H2F9 335 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 MAGEF1Q9HAY2 307 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 LRTM1Q9HBL6 345 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 ZNF701Q9NV72 531 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 HRASLS2Q9NWW9 162 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 SOHLH2Q9NX45 425 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 NSMCE4AQ9NXX6 385 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 TMEM181Q9P2C4 612 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 FBXL4Q9UKA2 621 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 TRAF3IP3Q9Y228 551 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 RNF6Q9Y252 685 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 KCNK6Q9Y257 313 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 COQ4Q9Y3A0 265 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 ARID1AO14497 2285 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 CHD3Q12873 2000 aaKnown RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 LOC100509620A0A075B734 347 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 A8MX80 341 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 SLCO1B7G3V0H7 640 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 TTI1O43156 1089 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF749O43361 778 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ADAM20O43506 726 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF500O60304 480 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 OR10H2O60403 315 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 SMPD2O60906 423 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ERAL1O75616 437 aaKnown RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 AP2A2O94973 939 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 WDPCPO95876 746 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 BCL10O95999 233 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 CA4P22748 312 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 SLC6A6P31641 620 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 TPD52P55327 224 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 IRX1P78414 480 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 CDR2Q01850 454 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 DMTNQ08495 405 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ABRQ12979 859 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 STK4Q13043 487 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 CYTH1Q15438 398 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 SLC5A12Q1EHB4 618 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 PARP15Q460N3 678 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF789Q5FWF6 425 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ADAMTSL4-AS1Q5T5F5 129 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 RHBDD2Q6NTF9 364 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 LEKR1Q6ZMV7 388 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 C11orf57Q6ZUT1 292 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 TMPRSS11FQ6ZWK6 438 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 NLRP14Q86W24 1093 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 NDUFAF2Q8N183 169 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 IQUBQ8NA54 791 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF397Q8NF99 534 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 KBTBD8Q8NFY9 601 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 HPSE2Q8WWQ2 592 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ROBO4Q8WZ75 1007 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 LPGAT1Q92604 370 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF653Q96CK0 615 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 CXorf40BQ96DE9 158 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZMYND19Q96E35 227 aaPredicted RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ABHD1Q96SE0 405 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 NPY6RQ99463 290 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 OLFM1Q99784 485 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 PLEKHF2Q9H8W4 249 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 WDR54Q9H977 334 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 PIGVQ9NUD9 493 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 GIMAP4Q9NUV9 329 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 INTS9Q9NV88 658 aaKnown RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 ATAD3AQ9NVI7 634 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.96□□□□□ -1.78
VPS50-214ENST00000477935 OR12D3Q9UGF7 316 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 TEKT2Q9UIF3 430 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 ZDHHC2Q9UIJ5 367 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 NXT1Q9UKK6 140 aaKnown RBP3.96□□□□□ -1.78
VPS50-214ENST00000477935 SVEP1Q4LDE5 3571 aa3.96□□□□□ -1.78
VPS50-214ENST00000477935 WNK1Q9H4A3 2382 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 IGHV4-4A0A075B6R2 117 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 A0A087WW49 117 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OR5H15A6NDH6 313 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 PDZK1P1A8MUH7 402 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 TMEM150CB9EJG8 249 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 NPIPA5E9PKD4 350 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 TRAFD1O14545 582 aaPredicted RBP3.95□□□□□ -1.78
VPS50-214ENST00000477935 SOD1P00441 154 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 HPP00738 406 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 SERPINA7P05543 415 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 ICAM2P13598 275 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 VCLP18206 1134 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 BMXP51813 675 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 B3GALT5-AS1P59052 145 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 AP1S1P61966 158 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 AP1B1Q10567 949 aa3.95□□□□□ -1.78
VPS50-214ENST00000477935 BECN1Q14457 450 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms