RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ADAMTSL2Q86TH1 951 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 GPSM1Q86YR5 675 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 P3H2Q8IVL5 708 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CTAGE4Q8IX94 777 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 LAS2Q8IYD9 372 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ST13P4Q8IZP2 240 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 KRT78Q8N1N4 520 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 LIX1Q8N485 282 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SLC15A4Q8N697 577 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TTLQ8NG68 377 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 OR7G3Q8NG95 312 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SLC22A8Q8TCC7 542 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ZPLD1Q8TCW7 415 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TSPEARQ8WU66 669 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 MAIP1Q8WWC4 291 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DDB2Q92466 427 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ANKRD7Q92527 254 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 HGDQ93099 445 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ABTB1Q969K4 478 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 INTS12Q96CB8 462 aaKnown RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 LRGUKQ96M69 825 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DGAT2Q96PD7 388 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 GAL3ST4Q96RP7 486 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 NODALQ96S42 347 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 EGFL8Q99944 293 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TBCDQ9BTW9 1192 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DERL2Q9GZP9 239 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 C11orf54Q9H0W9 315 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 NXF5Q9H1B4 397 aaKnown RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 COPS7BQ9H9Q2 264 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CAB39LQ9H9S4 337 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 UBTD1Q9HAC8 227 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CXorf21Q9HAI6 301 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SERHLQ9NQF3 203 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DNAJC11Q9NVH1 559 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 FBXO34Q9NWN3 711 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TEX10Q9NXF1 929 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 KLHL28Q9NXS3 571 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 WWOXQ9NZC7 414 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CTNNAL1Q9UBT7 734 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 COPS7AQ9UBW8 275 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 FETUBQ9UGM5 382 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SCOCQ9UIL1 159 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CORO1CQ9ULV4 474 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 A0A088AWK7 358 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 A0A0A6YYD5 115 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 A0A1W2PNV4 684 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 H0YC42 278 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PLOD2O00469 737 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PHGDHO43175 533 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ARHGEF9O43307 516 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 HCRTR2O43614 444 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ZIC3O60481 467 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SMPD2O60906 423 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ICOSLGO75144 302 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 UGT2B11O75310 529 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 STK16O75716 305 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GOSR1O95249 250 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TTC4O95801 387 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 AIFM1O95831 613 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CGAP01215 116 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GBAP04062 536 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CCDC166P0CW27 439 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CD1DP15813 335 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PAX1P15863 534 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF10P21506 573 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GPX3P22352 226 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CRYGSP22914 178 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CNTFP26441 200 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SSR2P43308 183 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 HTR3AP46098 478 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TPD52P55327 224 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CLDN18P56856 261 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 RPS13P62277 151 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 IRF8Q02556 426 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SRYQ05066 204 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TNK1Q13470 666 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 FRG1Q14331 258 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TBCCQ15814 346 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 NNATQ16517 81 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PDK4Q16654 411 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 AP5B1Q2VPB7 878 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GRAMD1BQ3KR37 738 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TOR2AQ5JU69 321 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 KHDRBS2Q5VWX1 349 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ANGPTL8Q6UXH0 198 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SLC29A4Q7RTT9 530 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PEG10Q86TG7 708 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GPR180Q86V85 440 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PM20D2Q8IYS1 436 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 DND1Q8IYX4 353 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 NKAPQ8N5F7 415 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SNX31Q8N9S9 440 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PDPRQ8NCN5 879 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 HUS1BQ8NHY5 278 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GABPB2Q8TAK5 448 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 RDH11Q8TC12 318 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TANKQ92844 425 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 535.9 ms