RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MMAAQ8IVH4 418 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 EID3Q8N140 333 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 HDDC3Q8N4P3 179 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 LPCAT1Q8NF37 534 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 TSTD1Q8NFU3 115 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 OR5AP2Q8NGF4 316 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 OR52K1Q8NGK4 314 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 OR2A12Q8NGT7 310 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 BLOC1S5Q8TDH9 187 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 PRCCQ92733 491 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 SIPA1Q96FS4 1042 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 ZNF641Q96N77 438 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 FMO2Q99518 471 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 GABRG3Q99928 467 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 OMDQ99983 421 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 APOL2Q9BQE5 337 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 URM1Q9BTM9 101 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 MLPHQ9BV36 600 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 TDRD1Q9BXT4 1180 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 DGCR6LQ9BY27 220 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 TMEM245Q9H330 911 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 PRSS16Q9NQE7 514 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 GDF3Q9NR23 364 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 ARGLU1Q9NWB6 273 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 P4HTMQ9NXG6 502 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 HACD3Q9P035 362 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 NFKBIL1Q9UBC1 381 aaPredicted RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBR3-209ENST00000477461 SCML1Q9UN30 329 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 RPL26L1Q9UNX3 145 aaKnown RBP3.39□□□□□ -1.87
UBR3-209ENST00000477461 CHKBQ9Y259 395 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 CSAG2Q9Y5P2 127 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 MAD1L1Q9Y6D9 718 aa3.39□□□□□ -1.87
UBR3-209ENST00000477461 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 UQCRHLA0A096LP55 91 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 TRAV24A0A0B4J272 114 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 A0A0J9YYE9 177 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 C1orf232A0A0U1RR37 186 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LOC285095A0A1B0GVY8 99 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 MAGEB16A2A368 324 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 HEATR9A2RTY3 570 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 URADA6NGE7 173 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 SDR42E2A6NKP2 422 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 M0R296 226 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 TRAFD1O14545 582 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 ZNF195O14628 629 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 EIF3HO15372 352 aaKnown RBP eCLIP3.38□□□□□ -1.878e-6■□□□□ 10.6
UBR3-209ENST00000477461 STX7O15400 261 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 SLCO2B1O94956 709 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 APBB3O95704 486 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 TRBC1P01850 177 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 SLC4A1P02730 911 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 DCNP07585 359 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 CTSLP07711 333 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 UQCRHP07919 91 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PIRTP0C851 137 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 MLNP12872 115 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ZNF30P17039 623 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PSMA3P25788 255 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 IVDP26440 423 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 OXTRP30559 389 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CSTF2P33240 577 aaKnown RBP eCLIP3.38□□□□□ -1.87
UBR3-209ENST00000477461 PHBP35232 272 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ADRA1AP35348 466 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 MAGEA6P43360 314 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CXCL12P48061 93 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ZNF41P51814 821 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 RPS14P62263 151 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 MS4A2Q01362 244 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CNTN1Q12860 1018 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PDIA2Q13087 525 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 RAPSNQ13702 412 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 VEZF1Q14119 521 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 SLMAPQ14BN4 828 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 KCTD19Q17RG1 926 aaPredicted RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 HYAL4Q2M3T9 481 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ANKRD22Q5VYY1 191 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 KCTD11Q693B1 232 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 Q6ZS52 159 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 GPRIN3Q6ZVF9 776 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 IL17RELQ6ZVW7 336 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ERN2Q76MJ5 926 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 NLRP9Q7RTR0 991 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 GLT6D1Q7Z4J2 308 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 LRRTM1Q86UE6 522 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 MMD2Q8IY49 270 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 OTUD6BQ8N6M0 293 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 NAT8LQ8N9F0 302 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 EIF1ADQ8N9N8 165 aaKnown RBP3.38□□□□□ -1.87
UBR3-209ENST00000477461 OR4K1Q8NGD4 311 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 FBXO25Q8TCJ0 367 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 CXorf40AQ8TE69 158 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 PYROXD1Q8WU10 500 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.38□□□□□ -1.872e-6■■■■■ 29
UBR3-209ENST00000477461 EXT2Q93063 718 aa3.38□□□□□ -1.87
UBR3-209ENST00000477461 ART4Q93070 314 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms