RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZNF17P17021 662 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 ENPP1P22413 925 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 IL32P24001 234 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 GABRA3P34903 492 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 SFTPDP35247 375 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 MAP3K8P41279 467 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 PRIM2P49643 509 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 FOXG1P55316 489 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 RAC1P63000 192 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 ILF2Q12905 390 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 TOMM34Q15785 309 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 STK11Q15831 433 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 CYB5R2Q6BCY4 276 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 BHLHA15Q7RTS1 189 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 WDR75Q8IWA0 830 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 FAM9CQ8IZT9 166 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 OR2L13Q8N349 312 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 CDYL2Q8N8U2 506 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 BANPQ8N9N5 519 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 FBXO30Q8TB52 745 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 HSD17B8Q92506 261 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF75CPQ92670 426 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 MSI2Q96DH6 328 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 ERP27Q96DN0 273 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 SH3YL1Q96HL8 342 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 KCNA7Q96RP8 456 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 LMF2Q9BU23 707 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 SHARPINQ9H0F6 387 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 GLIPR2Q9H4G4 154 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 PTGES2Q9H7Z7 377 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 LRTM1Q9HBL6 345 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 EML4Q9HC35 981 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 SDHAF3Q9NRP4 125 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 TAS2R9Q9NYW1 312 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 VPS29Q9UBQ0 182 aa8.62□□□□□ -1.03
COL4A5-204ENST00000477429 MCTS1Q9ULC4 181 aaKnown RBP8.62□□□□□ -1.03
COL4A5-204ENST00000477429 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 A8MT66 165 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 VWC2LB2RUY7 222 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 STX16-NPEPL1H3BU86 382 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 STX16O14662 325 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 EIF3HO15372 352 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 SYNGR4O95473 234 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 OXSR1O95747 527 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 LINGO3P0C6S8 592 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 SRD5A1P18405 259 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 IGHV1-2P23083 117 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 TTKP33981 857 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 NTF4P34130 210 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 THBS2P35442 1172 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 HSD17B3P37058 310 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 MAGEA4P43358 317 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 MAGEA12P43365 314 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 NCBP2P52298 156 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 MANFP55145 182 aaKnown RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 CARD18P57730 90 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 MRPS22P82650 360 aaKnown RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 SLC18A2Q05940 514 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 BTKQ06187 659 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 FOXF1Q12946 379 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 DECR1Q16698 335 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 NDUFAF6Q330K2 333 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 UNC50Q53HI1 259 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 CPTPQ5TA50 214 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 METTL2BQ6P1Q9 378 aaKnown RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 STK32CQ86UX6 486 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 CCDC25Q86WR0 208 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 LILRA2Q8N149 483 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 FBXO25Q8TCJ0 367 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 ELP4Q96EB1 424 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 KLHL15Q96M94 604 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 ZNF300Q96RE9 604 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 ERP44Q9BS26 406 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 POTEKPQ9BYX7 375 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 TBL1XR1Q9BZK7 514 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 BRF2Q9HAW0 419 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 BARX1Q9HBU1 254 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-204ENST00000477429 EQTNQ9NQ60 294 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 KLHL13Q9P2N7 655 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 DCTN4Q9UJW0 460 aa8.61□□□□□ -1.03
COL4A5-204ENST00000477429 A0A087WV62 115 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 IGHV4-61A0A0C4DH41 118 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GOLGA8QA0A0J9YX86 632 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GNG14A0A1W2PPG7 69 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 C7orf72A4D263 438 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GOLGA8OA6NCC3 632 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GOLGA6L6A8MZA4 724 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ALG1L2C9J202 215 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GOLGA8NF8WBI6 632 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GOLGA8RI6L899 631 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 UBFD1O14562 309 aaKnown RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 GSTA2P09210 222 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 ACP2P11117 423 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 TCP1P17987 556 aaKnown RBP8.6□□□□□ -1.03
COL4A5-204ENST00000477429 MAPK1P28482 360 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 TYK2P29597 1187 aa8.6□□□□□ -1.03
COL4A5-204ENST00000477429 PLTPP55058 493 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms