RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF419Q96HQ0 510 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PLEKHA8Q96JA3 519 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 OPALINQ96PE5 141 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SIGLEC11Q96RL6 698 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NDNQ99608 321 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 NAPGQ99747 312 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RBM4BQ9BQ04 359 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 SLC30A2Q9BRI3 323 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CNPY3Q9BT09 278 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RBM4Q9BWF3 364 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CHID1Q9BWS9 393 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PLA2G12BQ9BX93 195 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 C1QTNF7Q9BXJ2 289 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PRRG3Q9BZD7 231 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DCLK3Q9C098 648 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FAM49AQ9H0Q0 323 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 LRRN3Q9H3W5 708 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ADAP2Q9NPF8 381 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MED4Q9NPJ6 270 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CNGB3Q9NQW8 809 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PHPT1Q9NRX4 125 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 FKBP14Q9NWM8 211 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ASB6Q9NWX5 421 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 MIOSQ9NXC5 875 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TUBA8Q9NY65 449 aaPredicted RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PTTG2Q9NZH5 202 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 CYTH4Q9UIA0 394 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ENPP5Q9UJA9 477 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 GGA2Q9UJY4 613 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 EMCNQ9ULC0 261 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 LAMP3Q9UQV4 416 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 EXOGQ9Y2C4 368 aaKnown RBP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 STARD10Q9Y365 291 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TMED3Q9Y3Q3 217 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF175Q9Y473 711 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 PUS1Q9Y606 427 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGN4-202ENST00000477243 DUSP10Q9Y6W6 482 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ARID2Q68CP9 1835 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 ARFGEF1Q9Y6D6 1849 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 TJP1Q07157 1748 aa2.62□□□□□ -1.99
HMGN4-202ENST00000477243 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 AKAP12Q02952 1782 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KIF13BQ9NQT8 1826 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 TRPM7Q96QT4 1865 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CACNA1EQ15878 2313 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KCNE1BA0A087WTH5 132 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KBTBD11-OT1A0A1B0GTJ5 212 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 FBLL1A6NHQ2 334 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 A6NNC1 897 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ARHGEF33A8MVX0 844 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 VWC2LB2RUY7 222 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 E5RGE8 158 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 E7ESA3 106 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 H0YIZ8 118 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 H7C1Q1 480 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RHODO00212 210 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 OR7A17O14581 309 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 TOR1AO14656 332 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RRHO14718 337 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CDC123O75794 336 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 AP2A2O94973 939 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RPP14O95059 124 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 BMP10O95393 424 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 EML2O95834 649 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PLAUP00749 431 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RNASE1P07998 156 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KRT7P08729 469 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 H2AFB1P0C5Y9 115 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 H2AFB2P0C5Z0 115 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PNMA6AP0CW24 399 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ARSBP15848 533 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 NCK1P16333 377 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CBLP22681 906 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 AADACP22760 399 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 COL8A1P27658 744 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CDH5P33151 784 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CNR2P34972 360 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 UGT1A5P35504 534 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 RPL13AP40429 203 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 P2RY2P41231 377 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 LIMS1P48059 325 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CASP4P49662 377 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PDX1P52945 283 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CEBPGP53567 150 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ELLP55199 621 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 HNRNPH2P55795 449 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 CLDN17P56750 224 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ARPC4P59998 168 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MAGOHP61326 146 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PITX1P78337 314 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 MRPS6P82932 125 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 KDSRQ06136 332 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 DLX2Q07687 328 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PPIDQ08752 370 aaKnown RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 IFFO1Q0D2I5 559 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ITGB3BPQ13352 177 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 ORC2Q13416 577 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PEX6Q13608 980 aa2.61□□□□□ -1.99
HMGN4-202ENST00000477243 PIGHQ14442 188 aaPredicted RBP2.61□□□□□ -1.99
HMGN4-202ENST00000477243 HNF4GQ14541 408 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms