RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 BRAT1Q6PJG6 821 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FIGLAQ6QHK4 219 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 WDR88Q6ZMY6 472 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 LRRC74BQ6ZQY2 392 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZBTB49Q6ZSB9 765 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CHST9Q7L1S5 443 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SMIM15Q7Z3B0 74 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC46A3Q7Z3Q1 461 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 HAUS6Q7Z4H7 955 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 VTCN1Q7Z7D3 282 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZNF410Q86VK4 478 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD46Q86W74 232 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TRIM69Q86WT6 500 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 VRK2Q86Y07 508 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NUDCD3Q8IVD9 361 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SERPINA12Q8IW75 414 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CCDC60Q8IWA6 550 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 CENPLQ8N0S6 344 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 C17orf78Q8N4C9 275 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FAM89BQ8N5H3 189 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 LINC00612Q8N6U2 182 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZNF614Q8N883 585 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CYB561A3Q8NBI2 242 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 OR7G3Q8NG95 312 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 OR13F1Q8NGS4 319 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 VANGL1Q8TAA9 524 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 OCC1Q8TAD7 63 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NANPQ8TBE9 248 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MRGPRDQ8TDS7 321 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SMPDL3AQ92484 453 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ELMO1Q92556 727 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 BORCS5Q969J3 196 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PSMG2Q969U7 264 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 GMPPAQ96IJ6 420 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 B3GALT6Q96L58 329 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 LINC00615Q96LM1 132 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 C10orf90Q96M02 699 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PACRGQ96M98 296 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 DGAT2Q96PD7 388 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 XPO6Q96QU8 1125 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 TEAD3Q99594 435 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PRRT1Q99946 306 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CITED1Q99966 193 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 LBHD1Q9BQE6 289 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 SYT15Q9BQS2 421 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 C2orf88Q9BSF0 95 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TUBGCP2Q9BSJ2 902 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ALKBH7Q9BT30 221 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 TEKT3Q9BXF9 490 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DGCR6LQ9BY27 220 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC19A3Q9BZV2 496 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 GPR88Q9GZN0 384 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RAB17Q9H0T7 212 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 VCXQ9H320 206 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PIGUQ9H490 435 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ASB7Q9H672 318 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RPF1Q9H9Y2 349 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 LPAR2Q9HBW0 351 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RAVER2Q9HCJ3 691 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZFP14Q9HCL3 533 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CSNK1G1Q9HCP0 422 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PCDHB16Q9NRJ7 776 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PNO1Q9NRX1 252 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 IMP3Q9NV31 184 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 MED17Q9NVC6 651 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TEX10Q9NXF1 929 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 WSB2Q9NYS7 404 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 ADAM22Q9P0K1 906 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DLGAP2Q9P1A6 1054 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MYEF2Q9P2K5 600 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC25A10Q9UBX3 287 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 BTNL2Q9UIR0 455 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FBXW2Q9UKT8 454 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PADI3Q9ULW8 664 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PTRH2Q9Y3E5 179 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 NUBP2Q9Y5Y2 271 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FKBP7Q9Y680 259 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RTL1A6NKG5 1358 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DHX57Q6P158 1386 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 CCDC7Q96M83 1385 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CEP152O94986 1710 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ZNF646O15015 1829 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 SCAF11Q99590 1463 aaKnown RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 A0A087WV48 116 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 A0A1B0GV90 55 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 A0A1W2PQM1 296 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 SLC5A10A0PJK1 596 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ARHGEF35A5YM69 484 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 MGAT4DA6NG13 374 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ANXA2P2A6NMY6 339 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 OR2AT4A6NND4 320 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 EFCAB7A8K855 629 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 A8MXQ7 604 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 A8MZ25 164 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 H3BQ06 376 aaPredicted RBP2.22□□□□□ -2.05
XRN1-211ENST00000477237 KLRC4-KLRK1H3BQV0 150 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CTDSP2O14595 271 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 CCSO14618 274 aa2.22□□□□□ -2.05
XRN1-211ENST00000477237 ACOX3O15254 700 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms