RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PRAMEF8Q5VWM4 474 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 PRAMEF7Q5VXH5 474 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 FAM83FQ8NEG4 500 aaPredicted RBP26.9■■□□□ 1.9
HOXB3-208ENST00000476342 BCAS4Q8TDM0 211 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 MAL2Q969L2 176 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 TRIM8Q9BZR9 551 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 TMEM38AQ9H6F2 299 aa26.9■■□□□ 1.9
HOXB3-208ENST00000476342 MRPS18CQ9Y3D5 142 aaKnown RBP26.9■■□□□ 1.9
HOXB3-208ENST00000476342 A0A0G2JPF8 293 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 A0A1B0GVC2 190 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 SERINC4A6NH21 518 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 HNRNPCL2B2RXH8 293 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 HNRNPCL3B7ZW38 293 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 GTPBP1O00178 669 aaKnown RBP26.89■■□□□ 1.89
HOXB3-208ENST00000476342 AIM2O14862 343 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 HCRTR2O43614 444 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 HNRNPCL1O60812 293 aaKnown RBP26.89■■□□□ 1.89
HOXB3-208ENST00000476342 HNRNPCL4P0DMR1 293 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 DPP4P27487 766 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 UQCRFS1P47985 274 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 SELPLGQ14242 412 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 CYP51A1Q16850 503 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 PEX5LQ8IYB4 626 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 C10orf111Q8N326 155 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 OR14L1PQ8NHC6 308 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 NEIL3Q8TAT5 605 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 TREX2Q9BQ50 279 aaPredicted RBP26.89■■□□□ 1.89
HOXB3-208ENST00000476342 OR2B2Q9GZK3 357 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 SLC6A15Q9H2J7 730 aa26.89■■□□□ 1.89
HOXB3-208ENST00000476342 KAT8Q9H7Z6 458 aaKnown RBP26.89■■□□□ 1.89
HOXB3-208ENST00000476342 CACYBPQ9HB71 228 aaKnown RBP26.89■■□□□ 1.89
HOXB3-208ENST00000476342 GTF3C1Q12789 2109 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 DSPPQ9NZW4 1301 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 CENPVL1A0A0U1RR11 272 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 B4DXG7 233 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 PYCARD-AS1I3L0S3 204 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 ABOP16442 354 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 GCKP35557 465 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 ADH7P40394 386 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 ART3Q13508 389 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 FGFBP1Q14512 234 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 MAPK14Q16539 360 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.88■■□□□ 1.89
HOXB3-208ENST00000476342 B4GALNT2Q8NHY0 566 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 BBS10Q8TAM1 723 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 SH3YL1Q96HL8 342 aaPredicted RBP26.88■■□□□ 1.89
HOXB3-208ENST00000476342 QRSL1Q9H0R6 528 aaKnown RBP26.88■■□□□ 1.89
HOXB3-208ENST00000476342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP26.88■■□□□ 1.89
HOXB3-208ENST00000476342 TAS2R10Q9NYW0 307 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 SLC35A3Q9Y2D2 325 aa26.88■■□□□ 1.89
HOXB3-208ENST00000476342 C15orf38-AP3S2A0A0A6YYH1 394 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 AGAP5A6NIR3 686 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 AQP7O14520 342 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 DBIP07108 87 aaKnown RBP26.87■■□□□ 1.89
HOXB3-208ENST00000476342 UBL4AP11441 157 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 SLC6A2P23975 617 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 PTGS2P35354 604 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 CDK6Q00534 326 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 EIPR1Q53HC9 387 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 FAM91A1Q658Y4 838 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 EIF3MQ7L2H7 374 aaKnown RBP26.87■■□□□ 1.89
HOXB3-208ENST00000476342 ARPINQ7Z6K5 226 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 SERPINA11Q86U17 422 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 SPPL2CQ8IUH8 684 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 NFKBIDQ8NI38 313 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 ZG16BQ96DA0 208 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 C1GALT1C1Q96EU7 318 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 BCL2L10Q9HD36 194 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 L3MBTL1Q9Y468 752 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 POLEQ07864 2286 aa26.87■■□□□ 1.89
HOXB3-208ENST00000476342 OR14I1A6ND48 311 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 ZNF264O43296 627 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 GMFGO60234 142 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 EIF4E2O60573 245 aaKnown RBP26.86■■□□□ 1.89
HOXB3-208ENST00000476342 SLC19A2O60779 497 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 CSTAP01040 98 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 IL7RP16871 459 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 RPS4Y1P22090 263 aaKnown RBP26.86■■□□□ 1.89
HOXB3-208ENST00000476342 NUDT2P50583 147 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 RNF144AP50876 292 aaPredicted RBP26.86■■□□□ 1.89
HOXB3-208ENST00000476342 ZNF117Q03924 483 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 WIPI1Q5MNZ9 446 aaPredicted RBP26.86■■□□□ 1.89
HOXB3-208ENST00000476342 REEP3Q6NUK4 255 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 YRDCQ86U90 279 aaKnown RBP26.86■■□□□ 1.89
HOXB3-208ENST00000476342 IFNEQ86WN2 208 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 C11orf65Q8NCR3 313 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 OR10A6Q8NH74 314 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 WDR60Q8WVS4 1066 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 SARAFQ96BY9 339 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 ECSITQ9BQ95 431 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 SPATA9Q9BWV2 254 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 CARD8Q9Y2G2 431 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 PCNX3Q9H6A9 2034 aa26.86■■□□□ 1.89
HOXB3-208ENST00000476342 WISP1O95388 367 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 P2RX1P51575 399 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 RBBP4Q09028 425 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 SCARB2Q14108 478 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 RABL3Q5HYI8 236 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 RPS26P11Q5JNZ5 115 aaPredicted RBP26.85■■□□□ 1.89
HOXB3-208ENST00000476342 HACD2Q6Y1H2 254 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms