RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SLC44A2Q8IWA5 706 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 GPALPP1Q8IXQ4 340 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 RNF113BQ8IZP6 322 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 CLEC4FQ8N1N0 589 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 MEIOBQ8N635 442 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 OR2T29Q8NH02 315 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 C16orf52Q8NHV5 167 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SLC22A8Q8TCC7 542 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SSC4DQ8WTU2 575 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DIO2Q92813 273 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SLCO4A1Q96BD0 722 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 OTUB1Q96FW1 271 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TPD52L3Q96J77 140 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 FER1L6-AS2Q96M78 137 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 HS6ST2Q96MM7 605 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SECISBP2Q96T21 854 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 RBM4BQ9BQ04 359 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 YIPF4Q9BSR8 244 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 RBM4Q9BWF3 364 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DEFB126Q9BYW3 111 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TRIM8Q9BZR9 551 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 SLC38A1Q9H2H9 487 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 REEP1Q9H902 201 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 MMP25Q9NPA2 562 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 KRCC1Q9NPI7 259 aaPredicted RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 EQTNQ9NQ60 294 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TEKT2Q9UIF3 430 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TCFL5Q9UL49 500 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TMCC3Q9ULS5 477 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 PCDHGB6Q9Y5F9 930 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 TEP1Q99973 2627 aaKnown RBP6.48□□□□□ -1.37
SHQ1-207ENST00000475558 DSPPQ9NZW4 1301 aa6.48□□□□□ -1.37
SHQ1-207ENST00000475558 MED13Q9UHV7 2174 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 NSG1A0A0A6YYJ2 146 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 A0A1W2PQD3 144 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 OR6C70A6NIJ9 312 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TTLL8A6PVC2 850 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TP53I11O14683 189 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 EIF4E2O60573 245 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 E2F6O75461 281 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 JRKO75564 520 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 GCM2O75603 506 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 DNAJB5O75953 348 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 OXSR1O95747 527 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 HPRP00739 348 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CT62P0C5K7 136 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CT45A8P0DMV1 189 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CT45A9P0DMV2 189 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ACP2P11117 423 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 NID1P14543 1247 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 FPR1P21462 350 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 GNLYP22749 145 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 FKBP2P26885 142 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 MSX1P28360 303 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SSTR4P31391 388 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 STAT5AP42229 794 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SLC6A8P48029 635 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 MAP2K6P52564 334 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RAD23AP54725 363 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SLC26A5P58743 744 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RPS26P62854 115 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RNF4P78317 190 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CHRNEQ04844 493 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ST3GAL3Q11203 375 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 COX10Q12887 443 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 EXOSC7Q15024 291 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TAF11Q15544 211 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 GPR68Q15743 365 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 DUSP7Q16829 419 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 FLYWCH1Q4VC44 716 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CT45A2Q5DJT8 189 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 OGFRL1Q5TC84 451 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RNF220Q5VTB9 566 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TYW3Q6IPR3 259 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SHQ1Q6PI26 577 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 OPN5Q6U736 354 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RRM2BQ7LG56 351 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RANBP3LQ86VV4 465 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SLC34A3Q8N130 599 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TMEM102Q8N9M5 508 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 NFAM1Q8NET5 270 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 OR5D16Q8NGK9 328 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 THAP4Q8WY91 577 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 LRTOMTQ8WZ04 291 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CDS1Q92903 461 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TAMM41Q96BW9 452 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 HSH2DQ96JZ2 352 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 C7orf34Q96L11 122 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 IMMP1LQ96LU5 166 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF300Q96RE9 604 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 EPYCQ99645 322 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 PIP5K1AQ99755 562 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 PKP2Q99959 881 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF559Q9BR84 538 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 FNDC11Q9BVV2 318 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RBCK1Q9BYM8 510 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TRIM2Q9C040 744 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 WWTR1Q9GZV5 400 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms