RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 KLHL13Q9P2N7 655 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 GDF2Q9UK05 429 aaPredicted RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 A0A0J9YW62 118 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 A8MT66 165 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 PPP6CO00743 305 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SUPT7LO94864 414 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 INHBAP08476 426 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 HPGDP15428 266 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SLC25A16P16260 332 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 TSPAN8P19075 237 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ELK4P28324 431 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 GABRA3P34903 492 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 HSD17B3P37058 310 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 MAGEA12P43365 314 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SERPINB9P50453 376 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 CASP9P55211 416 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 VLDLRP98155 873 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 LOXL1Q08397 574 aaPredicted RBP11.2□□□□□ -0.62
SKA3-206ENST00000475251 C2orf80Q0P641 193 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
SKA3-206ENST00000475251 PLPPR5Q32ZL2 321 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 GRAMD1BQ3KR37 738 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 GPRIN3Q6ZVF9 776 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 CEP112Q8N8E3 955 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 OR10H5Q8NGA6 315 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 CDC26Q8NHZ8 85 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 GPR151Q8TDV0 419 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SLC9A6Q92581 669 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 MUCL1Q96DR8 90 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ELP4Q96EB1 424 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 APIPQ96GX9 242 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 RNF145Q96MT1 663 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ZNF382Q96SR6 550 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 EBPLQ9BY08 206 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ACPTQ9BZG2 426 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ACSS3Q9H6R3 686 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 MED17Q9NVC6 651 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 SIRT5Q9NXA8 310 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 ZNF225Q9UK10 706 aa11.2□□□□□ -0.62
SKA3-206ENST00000475251 WBP11Q9Y2W2 641 aaKnown RBP11.2□□□□□ -0.62
SKA3-206ENST00000475251 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 FAM234BA2RU67 622 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 GPRIN2O60269 458 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 NDUFS7O75251 213 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 ADAP00813 363 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 ENO1P06733 434 aaKnown RBP11.19□□□□□ -0.62
SKA3-206ENST00000475251 TAC1P20366 129 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 PSMA4P25789 261 aaKnown RBP11.19□□□□□ -0.62
SKA3-206ENST00000475251 LCN1P31025 176 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 CDH11P55287 796 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 PPA1Q15181 289 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 GLE1Q53GS7 698 aaKnown RBP11.19□□□□□ -0.62
SKA3-206ENST00000475251 CYB5R2Q6BCY4 276 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 APOOLQ6UXV4 268 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 Q6ZT83 130 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 BHLHA15Q7RTS1 189 aaPredicted RBP11.19□□□□□ -0.62
SKA3-206ENST00000475251 TUSC5Q8IXB3 177 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 LILRA2Q8N149 483 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 ZNF619Q8N2I2 560 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 SLC43A2Q8N370 569 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 ABHD3Q8WU67 409 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 C19orf24Q9BVV8 132 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 GLIPR2Q9H4G4 154 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 TMEM185BQ9H7F4 350 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 B3GALT5Q9Y2C3 310 aa11.19□□□□□ -0.62
SKA3-206ENST00000475251 PCNX3Q9H6A9 2034 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 DPRXA6NFQ7 191 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 ELOA3DA6NLF2 546 aaPredicted RBP11.18□□□□□ -0.62
SKA3-206ENST00000475251 KIF2AO00139 706 aaPredicted RBP11.18□□□□□ -0.62
SKA3-206ENST00000475251 SCDO00767 359 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 UBFD1O14562 309 aaKnown RBP11.18□□□□□ -0.62
SKA3-206ENST00000475251 PRKD3O94806 890 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
SKA3-206ENST00000475251 HSPA4LO95757 839 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CD8AP01732 235 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 OPN1LWP04000 364 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 YES1P07947 543 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CSF3P09919 207 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 PRPS2P11908 318 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CHN1P15882 459 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 BTKQ06187 659 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 TSC22D1Q15714 1073 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 ELOA3BQ3SY89 546 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 ZDHHC24Q6UX98 284 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 IKBIPQ70UQ0 350 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 FCRLAQ7L513 359 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 P2RY8Q86VZ1 359 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CDRT4Q8N9R6 151 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 ELOA3Q8NG57 546 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CEP70Q8NHQ1 597 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 PIK3R3Q92569 461 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms