RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GPR139Q6DWJ6 353 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 BAIAP2L2Q6UXY1 529 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PELI2Q9HAT8 420 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CDK2P24941 298 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 SUOXP51687 545 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CDK5R2Q13319 367 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 DCUN1D4Q92564 292 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 SYT3Q9BQG1 590 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 ACPTQ9BZG2 426 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 HSPB6O14558 160 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 SPDEFO95238 335 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 C1orf105O95561 183 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 DCNP07585 359 aaKnown RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 MYF6P23409 242 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CCR7P32248 378 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 OR1D4P47884 311 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 DAP3P51398 398 aaKnown RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 P2RY14Q15391 338 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 LTC4SQ16873 150 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 LYSMD4Q5XG99 296 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 LCN10Q6JVE6 187 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PDZD3Q86UT5 571 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CPNE7Q9UBL6 633 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 RP1P56715 2156 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PRICKLE3O43900 615 aaPredicted RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 HTR2BP41595 481 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 MORN1Q5T089 497 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PRSS48Q7RTY5 328 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 ATOH1Q92858 354 aaPredicted RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 CASD1Q96PB1 797 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 C7orf50Q9BRJ6 194 aaKnown RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 LRIT1Q9P2V4 623 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 A0A0G2JMP0 313 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 NPC1O15118 1278 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 LRRTM2O43300 516 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CXCR4P61073 352 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 ZP2Q05996 745 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 DCST2Q5T1A1 773 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 GARNL3Q5VVW2 1013 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 TMEM184AQ6ZMB5 413 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 VRK2Q86Y07 508 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 OR4M2Q8NGB6 313 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PRDM9Q9NQV7 894 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 LRFN1Q9P244 771 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 SCML1Q9UN30 329 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 MED16Q9Y2X0 877 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 HMGN2P05204 90 aaKnown RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 PTPN6P29350 595 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 PRSS3P35030 304 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 HLCSP50747 726 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 ZNF33BQ06732 778 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 ANKRD54Q6NXT1 300 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 IL20RBQ6UXL0 311 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 CDRT4Q8N9R6 151 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 TANKQ92844 425 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 DTD2Q96FN9 168 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 C4orf36Q96KX1 117 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 KLF16Q9BXK1 252 aaPredicted RBP10.32□□□□□ -0.76
VAPB-204ENST00000475243 PINK1Q9BXM7 581 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 MMP28Q9H239 520 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 CRABP1P29762 137 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PCGF2P35227 344 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 AHRP35869 848 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 WDR5P61964 334 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 MRPL10Q7Z7H8 261 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 SLC15A4Q8N697 577 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 METTL25Q8N6Q8 603 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 RDH14Q9HBH5 336 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 TAS2R8Q9NYW2 309 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 KLHL13Q9P2N7 655 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 NUP214P35658 2090 aaPredicted RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 IGKV6-21A0A0C4DH24 114 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PPP6CO00743 305 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PRKYO43930 277 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 F10P00742 488 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 GLO1Q04760 184 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 KCTD20Q7Z5Y7 419 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 MS4A15Q8N5U1 240 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 EID2Q8N6I1 236 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 B3GNT7Q8NFL0 401 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 SYNPRQ8TBG9 265 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 SDC1P18827 310 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 POU3F2P20265 443 aaPredicted RBP10.31□□□□□ -0.76
VAPB-204ENST00000475243 CXCL12P48061 93 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 CAV3P56539 151 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 WNT4P56705 351 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ACTBP60709 375 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ACTG1P63261 375 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 AKR1C8PQ5T2L2 129 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 OR9A4Q8NGU2 314 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 ENKD1Q9H0I2 346 aa10.31□□□□□ -0.76
VAPB-204ENST00000475243 GCM1Q9NP62 436 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms