RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 EMX2Q04743 252 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 KLF1Q13351 362 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OLIG2Q13516 323 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CDH18Q13634 790 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 HYAL4Q2M3T9 481 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 UGT3A2Q3SY77 523 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TTC23Q5W5X9 447 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC35E3Q7Z769 313 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SPPL2CQ8IUH8 684 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 C12orf45Q8N5I9 185 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NHLRC2Q8NBF2 726 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SIDT2Q8NBJ9 832 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 GLIS3Q8NEA6 775 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR11H4Q8NGC9 324 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC22A17Q8WUG5 538 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 RLN3Q8WXF3 142 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 C11orf40Q8WZ69 217 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 C12orf42Q96LP6 360 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR2A14Q96R47 310 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF382Q96SR6 550 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ELF4Q99607 663 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WDR83Q9BRX9 315 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FGFBP2Q9BYJ0 223 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ABCB8Q9NUT2 735 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LYARQ9NX58 379 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ZCWPW2A0A1B0GU75 182 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CXCR6O00574 342 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MMP20O60882 483 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CTSAP10619 480 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 GSTM3P21266 225 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MST1P26927 711 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 APEX1P27695 318 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MMP15P51511 669 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PRKAG1P54619 331 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TPI1P60174 286 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CAV1Q03135 178 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 GK2Q14410 553 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NFATC4Q14934 902 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ARL6IP1Q15041 203 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TTLL9Q3SXZ7 439 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MIIPQ5JXC2 388 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NPNTQ6UXI9 565 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LRRN1Q6UXK5 716 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ALKAL1Q6UXT8 129 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SPATA19Q7Z5L4 167 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CHSY1Q86X52 802 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 REPS2Q8NFH8 660 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 BPIFB6Q8NFQ5 453 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WDR20Q8TBZ3 569 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SAP25Q8TEE9 199 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PSMG2Q969U7 264 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CREB3L1Q96BA8 519 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 KLHL32Q96NJ5 620 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WFIKKN1Q96NZ8 548 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC22A12Q96S37 553 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LPAR4Q99677 370 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 EGFL8Q99944 293 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MUC13Q9H3R2 512 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NDUFAF4Q9P032 175 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OSGIN1Q9UJX0 560 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC6A5Q9Y345 797 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WNT6Q9Y6F9 365 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 COLEC10Q9Y6Z7 277 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LCTP09848 1927 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LOXHD1Q8IVV2 1947 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LRRC37A2A6NM11 1700 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 IGSF9BQ9UPX0 1349 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FAM230AA0A1W2PPH8 454 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FAM171A2A8MVW0 826 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC28A1O00337 649 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 RAD51CO43502 376 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 MT-ND5P03915 603 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 LPLP06858 475 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 F3P13726 295 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NID1P14543 1247 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 KLRC2P26717 231 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 IDH2P48735 452 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 IL9RQ01113 521 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SURF2Q15527 256 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 RPE65Q16518 533 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PRSS48Q7RTY5 328 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PIWIL4Q7Z3Z4 852 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ZC3HC1Q86WB0 502 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 UNC93AQ86WB7 457 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 C4orf19Q8IY42 314 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WDTC1Q8N5D0 677 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR52N4Q8NGI2 321 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 F2RL3Q96RI0 385 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NAA11Q9BSU3 229 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TUBB6Q9BUF5 446 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SPATC1LQ9H0A9 340 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 VCX2Q9H322 139 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 WDR54Q9H977 334 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ABCB10Q9NRK6 738 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 C2orf42Q9NWW7 574 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SMCHD1A6NHR9 2005 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 M0QZ24 198 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms