RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 OXSR1O95747 527 aaPredicted RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 IFNA2P01563 188 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 SOD3P08294 240 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PSMB1P20618 241 aaKnown RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 IL11P20809 199 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 IL32P24001 234 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 SFTPDP35247 375 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 IDUAP35475 653 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PRKAG1P54619 331 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PKNOX1P55347 436 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 SLC18A2Q05940 514 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 FAM71E1Q6IPT2 247 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 MFSD12Q6NUT3 480 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PODNL1Q6PEZ8 512 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF551Q7Z340 670 aaPredicted RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PHC2Q8IXK0 858 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 GTPBP8Q8N3Z3 284 aaPredicted RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 STEAP2Q8NFT2 490 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 KBTBD8Q8NFY9 601 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 ROBO4Q8WZ75 1007 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 ZBTB8AQ96BR9 441 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 REXO5Q96IC2 774 aaKnown RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 OR10A4Q9H209 315 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
CCDC78-209ENST00000474647 MID1IP1Q9NPA3 183 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 MYNNQ9NPC7 610 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 MED17Q9NVC6 651 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 FBXO34Q9NWN3 711 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF180Q9UJW8 692 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 PLCE1Q9P212 2302 aa12.48□□□□□ -0.41
CCDC78-209ENST00000474647 SHBGP04278 402 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 HPGDP15428 266 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 IMPDH1P20839 514 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ATP5F1P24539 256 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 GCAP28676 217 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 FOXA1P55317 472 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 RAC1P63000 192 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 VPS26BQ4G0F5 336 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 FIGNL1Q6PIW4 674 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 SLC22A9Q8IVM8 553 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 CCNYL1Q8N7R7 359 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 BANPQ8N9N5 519 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 SMAP2Q8WU79 429 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ZBED6CLQ96FA7 236 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-209ENST00000474647 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ALG2Q9H553 416 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 PPCSQ9HAB8 311 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 ALPK2Q86TB3 2170 aa12.47□□□□□ -0.41
CCDC78-209ENST00000474647 TTC36A6NLP5 189 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 ALG1L2C9J202 215 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 OVOL3O00110 214 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 ADAMDEC1O15204 470 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 PDPK1O15530 556 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 TLX2O43763 284 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 CD5LO43866 347 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 ADAM11O75078 769 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 CRCPO75575 148 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 DANCRP0C864 163 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 PRPS2P11908 318 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 TAB1Q15750 504 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 CPTPQ5TA50 214 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 ANKRD26P1Q6NSI1 321 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 NUFIP2Q7Z417 695 aaKnown RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 LILRA2Q8N149 483 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 OR4C3Q8NH37 302 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 RNF128Q8TEB7 428 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 OSTF1Q92882 214 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 CIDECQ96AQ7 238 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 L3HYPDHQ96EM0 354 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 OTUB1Q96FW1 271 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 KLHL15Q96M94 604 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 TAS2R7Q9NYW3 318 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 GDF2Q9UK05 429 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-209ENST00000474647 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
CCDC78-209ENST00000474647 C7orf72A4D263 438 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 GOLGA8RI6L899 631 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 SCDO00767 359 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 NDUFS7O75251 213 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 NKX2-2O95096 273 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 NUDT14O95848 222 aa12.45□□□□□ -0.42
CCDC78-209ENST00000474647 ADAP00813 363 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms