RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CPTPQ5TA50 214 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 LRIG3Q6UXM1 1119 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 NUFIP2Q7Z417 695 aaKnown RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 SZRD1Q7Z422 152 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 DDIASQ8IXT1 998 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 SAMD14Q8IZD0 417 aaPredicted RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 METTL25Q8N6Q8 603 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ATP6V1C2Q8NEY4 427 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 OR6Y1Q8NGX8 325 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 OR10D3Q8NH80 312 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 OR5AK3PQ8NH89 298 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TCP10LQ8TDR4 215 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TWIST2Q8WVJ9 160 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ZG16BQ96DA0 208 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 CCDC126Q96EE4 140 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 DNAJA3Q96EY1 480 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 RNF145Q96MT1 663 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 SRXN1Q9BYN0 137 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TBL1XR1Q9BZK7 514 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 KLHL4Q9C0H6 718 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 L2HGDHQ9H9P8 463 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 GPATCH2Q9NW75 528 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ATP6V1HQ9UI12 483 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 FOXD3Q9UJU5 478 aaPredicted RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 ABCG2Q9UNQ0 655 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ALPK2Q86TB3 2170 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 CADP27708 2225 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 IGHV3-15A0A0B4J1V0 119 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 WDR91A4D1P6 747 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 CCDC151A5D8V7 595 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 RGS14O43566 566 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 NDUFB5O43674 189 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 FCMRO60667 390 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 TBX19O60806 448 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 SKAP2O75563 359 aaPredicted RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 LY6G6DO95868 133 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 LINGO3P0C6S8 592 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 NID1P14543 1247 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 POU2F1P14859 743 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 SFTPDP35247 375 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 GCKP35557 465 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 KCNJ5P48544 419 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 NR1H2P55055 460 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 DIO3P55073 304 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 NKX6-1P78426 367 aaPredicted RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 C17orf67Q0P5P2 114 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 GANABQ14697 944 aaKnown RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 LASP1Q14847 261 aaKnown RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 PLPPR5Q32ZL2 321 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 XKR7Q5GH72 579 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 IL23RQ5VWK5 629 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 STAC2Q6ZMT1 411 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 IKBIPQ70UQ0 350 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 RIMKLAQ8IXN7 391 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 CLECL1Q8IZS7 167 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 GTPBP8Q8N3Z3 284 aaPredicted RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 MEIOBQ8N635 442 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 OR5D16Q8NGK9 328 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 LILRB1Q8NHL6 650 aaPredicted RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 FBXO27Q8NI29 283 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 RAB3IL1Q8TBN0 382 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 GPR119Q8TDV5 335 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 OSTF1Q92882 214 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 NEUROG1Q92886 237 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 APOPT1Q96IL0 206 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 ZFP3Q96NJ6 502 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 CCT7Q99832 543 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 PIGMQ9H3S5 423 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 C12orf49Q9H741 205 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 UBTD1Q9HAC8 227 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 ING1Q9UK53 422 aaPredicted RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 CARD8Q9Y2G2 431 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 STK38LQ9Y2H1 464 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 WBP11Q9Y2W2 641 aaKnown RBP7.22□□□□□ -1.25
USP48-207ENST00000471752 SNX8Q9Y5X2 465 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 AP4B1Q9Y6B7 739 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
USP48-207ENST00000471752 PRAMEF27A3QJZ7 478 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 ESPNB1AK53 854 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 NPIPB9F8W1W9 429 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 C16orf97H3BN30 126 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 KIF2AO00139 706 aaPredicted RBP7.21□□□□□ -1.26
USP48-207ENST00000471752 CASKO14936 926 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 SMAD7O15105 426 aaKnown RBP7.21□□□□□ -1.26
USP48-207ENST00000471752 SCAMP2O15127 329 aaKnown RBP7.21□□□□□ -1.26
USP48-207ENST00000471752 ADAMDEC1O15204 470 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 TYROBPO43914 113 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 KCNH1O95259 989 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 BPGMP07738 259 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 ALOX5P09917 674 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 CD8BP10966 210 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 G6PDP11413 515 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 ENPP1P22413 925 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 CRYGSP22914 178 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 NTF4P34130 210 aa7.21□□□□□ -1.26
USP48-207ENST00000471752 ETV4P43268 484 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms