RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RNF165Q6ZSG1 346 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 FAM220AQ7Z4H9 259 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 HSD11B1LQ7Z5J1 315 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF429Q86V71 674 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 LCA5Q86VQ0 697 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 LYPD1Q8N2G4 141 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TMCO5AQ8N6Q1 288 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 LEMD2Q8NC56 503 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF740Q8NDX6 193 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MDS2Q8NDY4 140 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM185AQ8NFB2 350 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 OR52I1Q8NGK6 324 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TRUB1Q8WWH5 349 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 SLC25A36Q96CQ1 311 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TBC1D10AQ9BXI6 508 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TEX13AQ9BXU3 409 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 FTHL17Q9BXU8 183 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 CHIAQ9BZP6 476 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 NACA2Q9H009 215 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 DDX47Q9H0S4 455 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 KAT8Q9H7Z6 458 aaKnown RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 SH2D2AQ9NP31 389 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 STOX2Q9P2F5 926 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 BCAP29Q9UHQ4 241 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 RIMS3Q9UJD0 308 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 WDR45Q9Y484 360 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 MAB21L2Q9Y586 359 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 TET2Q6N021 2002 aaPredicted RBP0.79□□□□□ -2.28
UBXN4-207ENST00000471246 CABIN1Q9Y6J0 2220 aa0.79□□□□□ -2.28
UBXN4-207ENST00000471246 THSD7BQ9C0I4 1608 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 PHF3Q92576 2039 aaKnown RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 IGLV4-69A0A075B6H9 119 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 LOC100131303A0A0U1RQF7 123 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF705EA8MWA4 302 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TMX2-CTNND1H3BSU7 103 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 CASKO14936 926 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 RIPK2O43353 540 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TRIM3O75382 744 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 NDUFA7O95182 113 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 PCCAP05165 728 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ZCCHC18P0CG32 403 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 BCKDHAP12694 445 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 HPDP32754 393 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 DLSTP36957 453 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 GNPDA1P46926 289 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 SUCLG1P53597 346 aaKnown RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 HERVK_113P61574 105 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 KRT83P78385 493 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 MYBPC1Q00872 1141 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 MAP2K1Q02750 393 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 GFPT1Q06210 699 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 C17orf67Q0P5P2 114 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 MADCAM1Q13477 382 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TFDP1Q14186 410 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 MORF4L2Q15014 288 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 NSDHLQ15738 373 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 CDKN3Q16667 212 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 CFAP221Q4G0U5 840 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM52BQ4KMG9 183 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TOR1AIP1Q5JTV8 583 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 PAGE3Q5JUK9 113 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TSPO2Q5TGU0 170 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 IL23RQ5VWK5 629 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 OR8G2PQ6IF36 304 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 IYDQ6PHW0 289 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 FAM159AQ6UWV7 190 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ARSKQ6UWY0 536 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 UNQ9370/PRO34162Q6UXP9 181 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 LRRC31Q6UY01 552 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 DNM1P46Q6ZS02 220 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 KRT77Q7Z794 578 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ADAMTSL2Q86TH1 951 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 LINC01551Q86U37 167 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 C10orf53Q8N6V4 93 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 OR51G1Q8NGK1 321 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 DNAJA4Q8WW22 397 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 OR1E3Q8WZA6 343 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 RPUSD4Q96CM3 377 aaKnown RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 EEF2KMTQ96G04 330 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF560Q96MR9 790 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 SPATA13Q96N96 652 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 NAP1L3Q99457 506 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 MCHR1Q99705 422 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 COQ7Q99807 217 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 ARHGDIGQ99819 225 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 DESI2Q9BSY9 194 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM121Q9BTD3 319 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 WRAP53Q9BUR4 548 aaKnown RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 RNF126Q9BV68 326 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 RSPO3Q9BXY4 272 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 COG4Q9H9E3 785 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 GPN2Q9H9Y4 310 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 HOMER3Q9NSC5 361 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 PAK1IP1Q9NWT1 392 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 CWC25Q9NXE8 425 aaPredicted RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 GDAP2Q9NXN4 497 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 DCDC2Q9UHG0 476 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 XPO7Q9UIA9 1087 aaKnown RBP0.78□□□□□ -2.28
UBXN4-207ENST00000471246 PHF11Q9UIL8 331 aa0.78□□□□□ -2.28
UBXN4-207ENST00000471246 TEX264Q9Y6I9 313 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms