RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 OR8J3Q8NGG0 315 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 OR9A2Q8NGT5 310 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 FBXO27Q8NI29 283 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SFXN5Q8TD22 340 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PPWD1Q96BP3 646 aaKnown RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 C18orf12Q96KH6 178 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 JSRP1Q96MG2 331 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ANKRD27Q96NW4 1050 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 GAL3ST4Q96RP7 486 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SECISBP2Q96T21 854 aaKnown RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PLEKHF2Q9H8W4 249 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SPAG4Q9NPE6 437 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SIRT3Q9NTG7 399 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SLC25A37Q9NYZ2 338 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 JKAMPQ9P055 326 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 VAPAQ9P0L0 249 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SLAMF8Q9P0V8 285 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PRPF19Q9UMS4 504 aaKnown RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 CORO2BQ9UQ03 480 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ERVK-19Q9WJR5 959 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 GMEB1Q9Y692 573 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 NCKAP5O14513 1909 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 VPS13CQ709C8 3753 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MAP1AP78559 2803 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 A0A087WV62 115 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 RNF103-CHMP3A0A140T963 221 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 A0A1W2PS29 197 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 EVPLLA8MZ36 301 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 PLOD2O00469 737 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 DNAJA2O60884 412 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 DNAJC8O75937 253 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SNX4O95219 450 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 KRT75O95678 551 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 GSNP06396 782 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 NT5EP21589 574 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SLC6A2P23975 617 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 OPRM1P35372 400 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MAGEA8P43361 318 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 TMED10P49755 219 aaKnown RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 CDK9P50750 372 aaKnown RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 PRR5P85299 388 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 DUSP2Q05923 314 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MAP4K2Q12851 820 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 GAB1Q13480 694 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 CAPRIN1Q14444 709 aaKnown RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF267Q14586 743 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 PRICKLE4Q2TBC4 344 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SPDYE7PQ495Y7 208 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SPATS1Q496A3 300 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 RUNDC3AQ59EK9 446 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF628Q5EBL2 1059 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 FNDC7Q5VTL7 733 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 NANOGP8Q6NSW7 305 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MSRB3Q8IXL7 192 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 OR56A1Q8NGH5 318 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SPPL2AQ8TCT8 520 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ZFP90Q8TF47 636 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 DIO2Q92813 273 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 RIT1Q92963 219 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MCUR1Q96AQ8 359 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 NTNG2Q96CW9 530 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ELP4Q96EB1 424 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 CPPED1Q9BRF8 314 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SLC39A3Q9BRY0 314 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SLC35A5Q9BS91 424 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ANGPTL4Q9BY76 406 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 MMADHCQ9H3L0 296 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-206ENST00000471037 RAD21L1Q9H4I0 556 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 CXorf36Q9H7Y0 433 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 NANOGQ9H9S0 305 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 CXorf21Q9HAI6 301 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 TPT1P8Q9HAU6 139 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 C3orf14Q9HBI5 128 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SLC6A13Q9NSD5 602 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 NTMQ9P121 344 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 ABCD2Q9UBJ2 740 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 C15orf41Q9Y2V0 281 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 SNX8Q9Y5X2 465 aa8.25□□□□□ -1.09
SF3A1-206ENST00000471037 C2orf92A0A1B0GVN3 265 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CLCA1A8K7I4 914 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CLIC1O00299 241 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 GSC2O15499 205 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 EMC8O43402 210 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 PLOD3O60568 738 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 COQ9O75208 318 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 BCAS2O75934 225 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 HRGP04196 525 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 INHBBP09529 407 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CTSSP25774 331 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CHI3L1P36222 383 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 PGM1P36871 562 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 MC3RP41968 323 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 CCT3P49368 545 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 ANXA11P50995 505 aaKnown RBP8.24□□□□□ -1.09
SF3A1-206ENST00000471037 SLC7A2P52569 658 aa8.24□□□□□ -1.09
SF3A1-206ENST00000471037 DCAF7P61962 342 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms