RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 TMEM41AQ96HV5 264 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF597Q96LX8 424 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 GNRHR2Q96P88 292 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 SPATA9Q9BWV2 254 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 TTTY12Q9BZ98 90 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 HOXD1Q9GZZ0 328 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 MTHFD2LQ9H903 347 aaPredicted RBP13.49□□□□□ -0.25
COL9A3-209ENST00000469852 CALML5Q9NZT1 146 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 CD300AQ9UGN4 299 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 CHST2Q9Y4C5 530 aa13.49□□□□□ -0.25
COL9A3-209ENST00000469852 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
COL9A3-209ENST00000469852 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 SERINC4A6NH21 518 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 J3QKU1 62 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 NDUFB5O43674 189 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 SNX4O95219 450 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 OPN1SWP03999 348 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 CELA3AP09093 270 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 HPGDP15428 266 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 TCN1P20061 433 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF117Q03924 483 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 GNA13Q14344 377 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 FGFBP1Q14512 234 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 CBLN3Q6UW01 205 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 BNC2Q6ZN30 1099 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF836Q6ZNA1 936 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 CISD2Q8N5K1 135 aaKnown RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF527Q8NB42 609 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 OR52P1PQ8NH57 321 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 PHOSPHO1Q8TCT1 267 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF524Q96C55 264 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 SH3YL1Q96HL8 342 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 TSPAN10Q9H1Z9 355 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 C1orf21Q9H246 121 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZFP64Q9NPA5 681 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 MED11Q9P086 117 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 PPP4R1LQ9P1A2 415 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 SUCOQ9UBS9 1254 aaKnown RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF443Q9Y2A4 671 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-209ENST00000469852 CARD8Q9Y2G2 431 aa13.48□□□□□ -0.25
COL9A3-209ENST00000469852 HEATR5AQ86XA9 2040 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 TPST1O60507 370 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 ADAM11O75078 769 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 EPPINO95925 133 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 FREM3P0C091 2139 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
COL9A3-209ENST00000469852 ETS2P15036 469 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 NCK1P16333 377 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 MAGEA5P43359 124 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 MASP1P48740 699 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 EEF1A1P68104 462 aaKnown RBP13.47□□□□□ -0.25
COL9A3-209ENST00000469852 PLGLB1Q02325 96 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 DMTNQ08495 405 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 GLIPR1L2Q4G1C9 344 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 TIGD3Q6B0B8 471 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 ERICH5Q6P6B1 374 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 PLCZ1Q86YW0 608 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 CLIP4Q8N3C7 705 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 FADS6Q8N9I5 356 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 OR2M3Q8NG83 312 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 OR1J4Q8NGS1 313 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 WDR60Q8WVS4 1066 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 CNOT9Q92600 299 aaKnown RBP13.47□□□□□ -0.25
COL9A3-209ENST00000469852 TAMM41Q96BW9 452 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 SNRNP40Q96DI7 357 aaKnown RBP13.47□□□□□ -0.25
COL9A3-209ENST00000469852 DSN1Q9H410 356 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
COL9A3-209ENST00000469852 RLIMQ9NVW2 624 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 EGFL7Q9UHF1 273 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 AP3M1Q9Y2T2 418 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 C15orf41Q9Y2V0 281 aa13.47□□□□□ -0.25
COL9A3-209ENST00000469852 IGLV3-32A0A0A0MS00 114 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 M0QX08 132 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 PDE5AO76074 875 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 MFN2O95140 757 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 CSTAP01040 98 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.25
COL9A3-209ENST00000469852 UBTFL6P0CB48 400 aaPredicted RBP13.46□□□□□ -0.25
COL9A3-209ENST00000469852 UBL4AP11441 157 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 HSD17B1P14061 328 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 NID1P14543 1247 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 IL7RP16871 459 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 MST1P26927 711 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 PGM1P36871 562 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.25
COL9A3-209ENST00000469852 MLLT10P55197 1068 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 NCALDP61601 193 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 PPIAP62937 165 aaKnown RBP13.46□□□□□ -0.25
COL9A3-209ENST00000469852 KCNJ10P78508 379 aa13.46□□□□□ -0.25
COL9A3-209ENST00000469852 SKP2Q13309 424 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms