RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
COL27A1-203ENST00000468565 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 PPP4R4Q6NUP7 873 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 C3P1Q6ZMU1 363 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 NCCRP1Q6ZVX7 275 aaPredicted RBP13.22□□□□□ -0.29
COL27A1-203ENST00000468565 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 EGLN2Q96KS0 407 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 AMDHD1Q96NU7 426 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 CIB1Q99828 191 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 DPY30Q9C005 99 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 GLIPR2Q9H4G4 154 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 ZNF696Q9H7X3 374 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 MAGEL2Q9UJ55 1249 aa13.22□□□□□ -0.29
COL27A1-203ENST00000468565 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 SDC1P18827 310 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 MASP1P48740 699 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 INTS11Q5TA45 600 aaKnown RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 SP5Q6BEB4 398 aaPredicted RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 DLEU7Q6UYE1 221 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 OR8J3Q8NGG0 315 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 SLC35A4Q96G79 324 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 COL21A1Q96P44 957 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 CGREF1Q99674 301 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 C9orf16Q9BUW7 83 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 MRPS26Q9BYN8 205 aaKnown RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 TRIM8Q9BZR9 551 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 UBQLN3Q9H347 655 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 REEP4Q9H6H4 257 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 EXO5Q9H790 373 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 METTL7AQ9H8H3 244 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 CHST11Q9NPF2 352 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 PNPLA3Q9NST1 481 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 C19orf53Q9UNZ5 99 aaPredicted RBP13.21□□□□□ -0.29
COL27A1-203ENST00000468565 HCFC1P51610 2035 aa13.21□□□□□ -0.29
COL27A1-203ENST00000468565 TCRBV5S2A0A599 114 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 C7orf72A4D263 438 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 UGT2B11O75310 529 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 GMNNO75496 209 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 IL6P05231 212 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 HPNP05981 417 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 ENDOUP21128 410 aaKnown RBP13.21□□□□□ -0.3
COL27A1-203ENST00000468565 GDF1P27539 372 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 MC3RP41968 323 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 ASMTP46597 345 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 DGKQP52824 942 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 TXNL4AP83876 142 aaKnown RBP13.21□□□□□ -0.3
COL27A1-203ENST00000468565 FXNQ16595 210 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 OR2L13Q8N349 312 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 LIX1Q8N485 282 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 NEIL3Q8TAT5 605 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 TMBIM1Q969X1 311 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 NODALQ96S42 347 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 COQ3Q9NZJ6 369 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 SLAMF8Q9P0V8 285 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 SPRR3Q9UBC9 169 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 PCDHGB3Q9Y5G1 929 aa13.21□□□□□ -0.3
COL27A1-203ENST00000468565 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 SAC3D1A6NKF1 404 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PDPK1O15530 556 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 TSPAN2O60636 221 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 WDR1O75083 606 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 NCK1P16333 377 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 ACVR2AP27037 513 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 MAPK1P28482 360 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PTGDSP41222 190 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 MYBPC1Q00872 1141 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PDE7AQ13946 482 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 EFR3AQ14156 821 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 TIGD3Q6B0B8 471 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 TMEM107Q6UX40 140 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
COL27A1-203ENST00000468565 TNIP2Q8NFZ5 429 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 ZFAND2BQ8WV99 257 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 TMCO6Q96DC7 493 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 MTERF3Q96E29 417 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 ELP4Q96EB1 424 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 NSMCE2Q96MF7 247 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 SLC29A1Q99808 456 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PKDREJQ9NTG1 2253 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 CENPEQ02224 2701 aa13.2□□□□□ -0.3
COL27A1-203ENST00000468565 PRAMEF25A6NGN4 478 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 UPK1AO00322 258 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 SNPHO15079 494 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 REM1O75628 298 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 CLPTM1O96005 669 aa13.19□□□□□ -0.3
COL27A1-203ENST00000468565 HOXD4P09016 255 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 PABPC4LP0CB38 370 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 DDX5P17844 614 aaKnown RBP13.19□□□□□ -0.3
COL27A1-203ENST00000468565 GRNP28799 593 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms