RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 E7EQL1 145 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 ABCD4O14678 606 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 NDUFB5O43674 189 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 HSD3B1P14060 373 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 SRD5A1P18405 259 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 EDNRAP25101 427 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 HSD3B2P26439 372 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 SFTPDP35247 375 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 HSD17B3P37058 310 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 PLTPP55058 493 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 SLC18A2Q05940 514 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 PDSS1Q5T2R2 415 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 LILRA2Q8N149 483 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 TMEM151AQ8N4L1 468 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 C10orf105Q8TEF2 133 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 ZBTB8AQ96BR9 441 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 ELP4Q96EB1 424 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 KLHL15Q96M94 604 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 PRSS50Q9UI38 385 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 ING1Q9UK53 422 aaPredicted RBP16.52■□□□□ 0.24
LINC00888-201ENST00000468380 TMCO1Q9UM00 188 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 SAR1BQ9Y6B6 198 aa16.52■□□□□ 0.24
LINC00888-201ENST00000468380 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 UBFD1O14562 309 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 RAD51CO43502 376 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 SMIM24O75264 130 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 LYZL6O75951 148 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 OXSR1O95747 527 aaPredicted RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 YES1P07947 543 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 PABPC4LP0CB38 370 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 SLC25A16P16260 332 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 TTKP33981 857 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 HTR6P50406 440 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 SERPINB8P50452 374 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 PSMD4P55036 377 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 MANFP55145 182 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 PPA1Q15181 289 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 STK11Q15831 433 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 UAP1Q16222 522 aaPredicted RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 UBAP2Q5T6F2 1119 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 Q6ZSR9 355 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 ZAR1Q86SH2 424 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 TRABD2AQ86V40 505 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 FBXO25Q8TCJ0 367 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 ACTRT2Q8TDY3 377 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 FAM168AQ92567 244 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 USB1Q9BQ65 265 aaKnown RBP16.51■□□□□ 0.23
LINC00888-201ENST00000468380 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 CBLN4Q9NTU7 201 aa16.51■□□□□ 0.23
LINC00888-201ENST00000468380 GOLGA8QA0A0J9YX86 632 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 GOLGA8OA6NCC3 632 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 GOLGA8NF8WBI6 632 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 PRKD3O94806 890 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 DDCP20711 480 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 TIA1P31483 386 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 MAP3K8P41279 467 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 MAGEA12P43365 314 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 BTKQ06187 659 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 C2orf80Q0P641 193 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 RAB35Q15286 201 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 RNPS1Q15287 305 aaKnown RBP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 ZNHIT3Q15649 155 aaPredicted RBP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 FAM120AOSQ5T036 256 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 ZDHHC24Q6UX98 284 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 Q6ZT83 130 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 TDRPQ86YL5 185 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 SH3YL1Q96HL8 342 aaPredicted RBP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 AMDHD1Q96NU7 426 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 DDX18Q9NVP1 670 aaKnown RBP16.5■□□□□ 0.23
LINC00888-201ENST00000468380 TAS2R7Q9NYW3 318 aa16.5■□□□□ 0.23
LINC00888-201ENST00000468380 DLX3O60479 287 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ULK1O75385 1050 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 KRT6AP02538 564 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 KRT6BP04259 564 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ANXA4P09525 319 aaPredicted RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 LINGO3P0C6S8 592 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ENPP1P22413 925 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 USF1P22415 310 aaPredicted RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ME2P23368 584 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 KRT6CP48668 564 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 LSM11P83369 360 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 CLCQ05315 142 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ACSM2AQ08AH3 577 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 ACSM2BQ68CK6 577 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 FCRLAQ7L513 359 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 PROX1Q92786 737 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 HOXB13Q92826 284 aaPredicted RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 CPNE4Q96A23 557 aaPredicted RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
LINC00888-201ENST00000468380 DHRS9Q9BPW9 319 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 CXorf36Q9H7Y0 433 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 CHODLQ9H9P2 273 aa16.49■□□□□ 0.23
LINC00888-201ENST00000468380 IGHV3-15A0A0B4J1V0 119 aa16.48■□□□□ 0.23
LINC00888-201ENST00000468380 A8MT66 165 aa16.48■□□□□ 0.23
LINC00888-201ENST00000468380 C9JVG2 144 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms