RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 HPCAP84074 193 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 KCNC4Q03721 635 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 ZNF117Q03924 483 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 FGFBP1Q14512 234 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 WIPI1Q5MNZ9 446 aaPredicted RBP10.03□□□□□ -0.8
MSH5-212ENST00000467319 DCST1Q5T197 706 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 PRAMEF8Q5VWM4 474 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 C1QL3Q5VWW1 255 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 PRAMEF7Q5VXH5 474 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 REP15Q6BDI9 236 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 DOLPP1Q86YN1 238 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 TREML1Q86YW5 311 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 GATSQ8NAP1 163 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 OR4K17Q8NGC6 315 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 SLC38A5Q8WUX1 472 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 PMM1Q92871 262 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 DTNBP1Q96EV8 351 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 ANKRD27Q96NW4 1050 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 CGREF1Q99674 301 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 CCDC106Q9BWC9 280 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 PRDM14Q9GZV8 571 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 DSN1Q9H410 356 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 MED11Q9P086 117 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
MSH5-212ENST00000467319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.03□□□□□ -0.8
MSH5-212ENST00000467319 ERRFI1Q9UJM3 462 aaPredicted RBP10.03□□□□□ -0.8
MSH5-212ENST00000467319 MKLN1Q9UL63 735 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 ICAM5Q9UMF0 924 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 CORO2BQ9UQ03 480 aa10.03□□□□□ -0.8
MSH5-212ENST00000467319 WIPF3A6NGB9 483 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 SERINC4A6NH21 518 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 ETV2O00321 342 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 MRASO14807 208 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 BCAS1O75363 584 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 ACTL6AO96019 429 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 BCHEP06276 602 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 RNF224P0DH78 156 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 NR2F1P10589 423 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 UBL4AP11441 157 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 HPGDP15428 266 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 ZNF17P17021 662 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 MSX1P28360 303 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 CHRNEQ04844 493 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 NFYCQ13952 458 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 SELPLGQ14242 412 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 GPR68Q15743 365 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 ADRM1Q16186 407 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 NDUFAF6Q330K2 333 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 GPAT3Q53EU6 434 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 RUNDC3AQ59EK9 446 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 GCNT6Q5T4J0 391 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 VASNQ6EMK4 673 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 CBLN3Q6UW01 205 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 YRDCQ86U90 279 aaKnown RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 MTDHQ86UE4 582 aaKnown RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 IFNEQ86WN2 208 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 FAM26EQ8N5C1 309 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 TOR1AIP2Q8NFQ8 470 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 MAL2Q969L2 176 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 SARAFQ96BY9 339 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 ARSGQ96EG1 525 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 TMEM19Q96HH6 336 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 DMRTA2Q96SC8 542 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 TREX2Q9BQ50 279 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 SLC39A3Q9BRY0 314 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 UGT2B28Q9BY64 529 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 QRSL1Q9H0R6 528 aaKnown RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 BCL2L10Q9HD36 194 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 TNFRSF10DQ9UBN6 386 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 DKKL1Q9UK85 242 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 SLC5A6Q9Y289 635 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 SLC6A5Q9Y345 797 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 MED12Q93074 2177 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 NCOA6Q14686 2063 aaPredicted RBP10.02□□□□□ -0.81
MSH5-212ENST00000467319 HECTD1Q9ULT8 2610 aa10.02□□□□□ -0.81
MSH5-212ENST00000467319 FREM3P0C091 2139 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 SPTBN1Q01082 2364 aaKnown RBP10.01□□□□□ -0.81
MSH5-212ENST00000467319 A0A087WZY1 265 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 C15orf38-AP3S2A0A0A6YYH1 394 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 A0A1B0GUH1 482 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 NPIPA2E9PIF3 369 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 NPIPA3F8WFD2 350 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 H3BNH8 94 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 PRRG2O14669 202 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 HCRTR2O43614 444 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 EIF4E2O60573 245 aaKnown RBP10.01□□□□□ -0.81
MSH5-212ENST00000467319 TRAPPC6AO75865 159 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 NTN1O95631 604 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 LDLRP01130 860 aa10.01□□□□□ -0.81
MSH5-212ENST00000467319 NPPAP01160 153 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms