RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TDP2O95551 362 aa2.54□□□□□ -2
XRN1-206ENST00000467077 FGF19O95750 216 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SEMA4FO95754 770 aa2.54□□□□□ -2
XRN1-206ENST00000467077 THY1P04216 161 aa2.54□□□□□ -2
XRN1-206ENST00000467077 GNA11P29992 359 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SRD5A2P31213 254 aa2.54□□□□□ -2
XRN1-206ENST00000467077 YWHABP31946 246 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 RPL9P32969 192 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 SERPINB6P35237 376 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SLC1A3P43003 542 aa2.54□□□□□ -2
XRN1-206ENST00000467077 RPP38P78345 283 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 GFPT1Q06210 699 aaPredicted RBP2.54□□□□□ -2
XRN1-206ENST00000467077 PLD1Q13393 1074 aa2.54□□□□□ -2
XRN1-206ENST00000467077 RUNX3Q13761 415 aa2.54□□□□□ -2
XRN1-206ENST00000467077 Q1RN00 199 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SMU1Q2TAY7 513 aa2.54□□□□□ -2
XRN1-206ENST00000467077 ARMCX4Q5H9R4 360 aa2.54□□□□□ -2
XRN1-206ENST00000467077 ZNF506Q5JVG8 444 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TPGS2Q68CL5 300 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SLC8B1Q6J4K2 584 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SLC27A4Q6P1M0 643 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TMEM270Q6UE05 265 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SIGLEC15Q6ZMC9 328 aa2.54□□□□□ -2
XRN1-206ENST00000467077 NAXDQ8IW45 347 aa2.54□□□□□ -2
XRN1-206ENST00000467077 KLHDC8AQ8IYD2 350 aa2.54□□□□□ -2
XRN1-206ENST00000467077 DEFB119Q8N690 84 aa2.54□□□□□ -2
XRN1-206ENST00000467077 ZNF713Q8N859 430 aaPredicted RBP2.54□□□□□ -2
XRN1-206ENST00000467077 BANPQ8N9N5 519 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SMYD1Q8NB12 490 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TSTD1Q8NFU3 115 aa2.54□□□□□ -2
XRN1-206ENST00000467077 OR1B1Q8NGR6 318 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SETD7Q8WTS6 366 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 CCDC12Q8WUD4 166 aaPredicted RBP2.54□□□□□ -2
XRN1-206ENST00000467077 RLN3Q8WXF3 142 aa2.54□□□□□ -2
XRN1-206ENST00000467077 CDKN2AIPNLQ96HQ2 116 aa2.54□□□□□ -2
XRN1-206ENST00000467077 CCDC43Q96MW1 224 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 PANX3Q96QZ0 392 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TNFRSF13CQ96RJ3 184 aa2.54□□□□□ -2
XRN1-206ENST00000467077 ACPTQ9BZG2 426 aa2.54□□□□□ -2
XRN1-206ENST00000467077 SLC39A8Q9C0K1 460 aa2.54□□□□□ -2
XRN1-206ENST00000467077 CLMPQ9H6B4 373 aa2.54□□□□□ -2
XRN1-206ENST00000467077 GPR173Q9NS66 373 aa2.54□□□□□ -2
XRN1-206ENST00000467077 ITM2BQ9Y287 266 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TMED7Q9Y3B3 224 aa2.54□□□□□ -2
XRN1-206ENST00000467077 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
XRN1-206ENST00000467077 PCNX2A6NKB5 2137 aa2.54□□□□□ -2
XRN1-206ENST00000467077 MYOFQ9NZM1 2061 aa2.54□□□□□ -2
XRN1-206ENST00000467077 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 A0A0A6YYC8 382 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 C13orf42A0A1B0GVH6 325 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ESYT2A0FGR8 921 aa2.53□□□□□ -2
XRN1-206ENST00000467077 MAGEB16A2A368 324 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SMIM30A4D0T7 59 aa2.53□□□□□ -2
XRN1-206ENST00000467077 FAM149AA5PLN7 773 aa2.53□□□□□ -2
XRN1-206ENST00000467077 I3L1I5 382 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 HDAC3O15379 428 aa2.53□□□□□ -2
XRN1-206ENST00000467077 RRP8O43159 456 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 VENTXO95231 258 aa2.53□□□□□ -2
XRN1-206ENST00000467077 PRAMEF12O95522 483 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SERPINF2P08697 491 aa2.53□□□□□ -2
XRN1-206ENST00000467077 OR4Q2P0C623 313 aa2.53□□□□□ -2
XRN1-206ENST00000467077 UROSP10746 265 aa2.53□□□□□ -2
XRN1-206ENST00000467077 HLA-EP13747 358 aa2.53□□□□□ -2
XRN1-206ENST00000467077 VCLP18206 1134 aa2.53□□□□□ -2
XRN1-206ENST00000467077 CHMLP26374 656 aa2.53□□□□□ -2
XRN1-206ENST00000467077 GABRR2P28476 465 aa2.53□□□□□ -2
XRN1-206ENST00000467077 MARCKSP29966 332 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 NMT1P30419 496 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 P2RY2P41231 377 aa2.53□□□□□ -2
XRN1-206ENST00000467077 MATKP42679 507 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ADARP55265 1226 aaKnown RBP2.53□□□□□ -2
XRN1-206ENST00000467077 NME5P56597 212 aa2.53□□□□□ -2
XRN1-206ENST00000467077 OSTNP61366 133 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SLC34A1Q06495 639 aa2.53□□□□□ -2
XRN1-206ENST00000467077 PPP2R5CQ13362 524 aa2.53□□□□□ -2
XRN1-206ENST00000467077 CYLC2Q14093 348 aaPredicted RBP2.53□□□□□ -2
XRN1-206ENST00000467077 ECSCRQ19T08 205 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SLC39A12Q504Y0 691 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ATAD3CQ5T2N8 411 aa2.53□□□□□ -2
XRN1-206ENST00000467077 LRRC38Q5VT99 294 aa2.53□□□□□ -2
XRN1-206ENST00000467077 AGAP6Q5VW22 663 aa2.53□□□□□ -2
XRN1-206ENST00000467077 CD300LGQ6UXG3 332 aa2.53□□□□□ -2
XRN1-206ENST00000467077 C17orf107Q6ZR85 190 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ITIH5Q86UX2 942 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SNX32Q86XE0 403 aa2.53□□□□□ -2
XRN1-206ENST00000467077 HIPK1Q86Z02 1210 aa2.53□□□□□ -2
XRN1-206ENST00000467077 LRRC49Q8IUZ0 686 aa2.53□□□□□ -2
XRN1-206ENST00000467077 ZBTB8OSQ8IWT0 167 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SLC43A2Q8N370 569 aa2.53□□□□□ -2
XRN1-206ENST00000467077 C10orf53Q8N6V4 93 aa2.53□□□□□ -2
XRN1-206ENST00000467077 CCDC148Q8NFR7 591 aa2.53□□□□□ -2
XRN1-206ENST00000467077 CCDC26Q8TAB7 109 aa2.53□□□□□ -2
XRN1-206ENST00000467077 MRAPQ8TCY5 172 aa2.53□□□□□ -2
XRN1-206ENST00000467077 TBCKQ8TEA7 893 aa2.53□□□□□ -2
XRN1-206ENST00000467077 SMPDL3AQ92484 453 aa2.53□□□□□ -2
XRN1-206ENST00000467077 AP2M1Q96CW1 435 aa2.53□□□□□ -2
XRN1-206ENST00000467077 TCEANC2Q96MN5 208 aa2.53□□□□□ -2
XRN1-206ENST00000467077 APOL2Q9BQE5 337 aa2.53□□□□□ -2
XRN1-206ENST00000467077 LXNQ9BS40 222 aa2.53□□□□□ -2
XRN1-206ENST00000467077 NFKBIZQ9BYH8 718 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms