RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 FAF1Q9UNN5 650 aaPredicted RBP19.62■□□□□ 0.73
LIME1-203ENST00000465591 A0A1W2PNV4 684 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 A0A1W2PQD3 144 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 SLC22A20A6NK97 555 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 SDHDO14521 159 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 CTAG2O75638 210 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 ALDOCP09972 364 aaKnown RBP19.61■□□□□ 0.73
LIME1-203ENST00000465591 LBPP18428 481 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 MAGOHP61326 146 aaKnown RBP19.61■□□□□ 0.73
LIME1-203ENST00000465591 FLYWCH1Q4VC44 716 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 OLIG3Q7RTU3 272 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 ANKRD46Q86W74 232 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 OR8J2Q8NGG1 315 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 GOT1L1Q8NHS2 421 aaPredicted RBP19.61■□□□□ 0.73
LIME1-203ENST00000465591 POC1BQ8TC44 478 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 TLCD1Q96CP7 247 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 TEX37Q96LM6 180 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 PINK1Q9BXM7 581 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 DPY30Q9C005 99 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 TMBIM4Q9HC24 238 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 MED17Q9NVC6 651 aa19.61■□□□□ 0.73
LIME1-203ENST00000465591 FOXD3Q9UJU5 478 aaPredicted RBP19.61■□□□□ 0.73
LIME1-203ENST00000465591 NPIPB9F8W1W9 429 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 LINC01387J3KSC0 135 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 RNASET2O00584 256 aaKnown RBP19.6■□□□□ 0.73
LIME1-203ENST00000465591 SCDO00767 359 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 SNNO75324 88 aaPredicted RBP19.6■□□□□ 0.73
LIME1-203ENST00000465591 PSMA4P25789 261 aaKnown RBP19.6■□□□□ 0.73
LIME1-203ENST00000465591 PLPPR5Q32ZL2 321 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 P4HA3Q7Z4N8 544 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 C6orf120Q7Z4R8 191 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 LINC01560Q8TB33 94 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 FNDC9Q8TBE3 224 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 MOAP1Q96BY2 351 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 LRRC46Q96FV0 321 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 GPATCH1Q9BRR8 931 aaKnown RBP19.6■□□□□ 0.73
LIME1-203ENST00000465591 GALNT8Q9NY28 637 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 AP4B1Q9Y6B7 739 aa19.6■□□□□ 0.73
LIME1-203ENST00000465591 CELSR1Q9NYQ6 3014 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 RNF103-CHMP3A0A140T963 221 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 FAM221AA4D161 298 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 TNFRSF21O75509 655 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 C1QCP02747 245 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 OPN1LWP04000 364 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 HPGDP15428 266 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 ATP6V1C1P21283 382 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 CASP9P55211 416 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 ZNF117Q03924 483 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 NDUFAF6Q330K2 333 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 KLHL26Q53HC5 615 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 SPANXN4Q5MJ08 99 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 VWA1Q6PCB0 445 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 CBLN3Q6UW01 205 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 CHMP1BQ7LBR1 199 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 GTPBP8Q8N3Z3 284 aaPredicted RBP19.59■□□□□ 0.73
LIME1-203ENST00000465591 METTL25Q8N6Q8 603 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 OR4A15Q8NGL6 344 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 B4GALNT2Q8NHY0 566 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 ACTRT2Q8TDY3 377 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 ZNF524Q96C55 264 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 RNF145Q96MT1 663 aa19.59■□□□□ 0.73
LIME1-203ENST00000465591 RBM24Q9BX46 236 aaKnown RBP19.59■□□□□ 0.73
LIME1-203ENST00000465591 MARCOQ9UEW3 520 aaPredicted RBP19.59■□□□□ 0.73
LIME1-203ENST00000465591 HIVEP1P15822 2718 aa19.58■□□□□ 0.73
LIME1-203ENST00000465591 A0A087WZY1 265 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 C9JVG2 144 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 KRT16P08779 473 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 ZNF17P17021 662 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 IL11P20809 199 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 MATN1P21941 496 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 PEX19P40855 299 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 NME5P56597 212 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 PON3Q15166 354 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 CTU2Q2VPK5 515 aaKnown RBP19.58■□□□□ 0.72
LIME1-203ENST00000465591 OGFOD2Q6N063 350 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 MISPQ8IVT2 679 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 LRRC34Q8IZ02 419 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 KIRREL3Q8IZU9 778 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 PHOSPHO1Q8TCT1 267 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 FAM222BQ8WU58 562 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 TESCQ96BS2 214 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 STARD4Q96DR4 205 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 ADGRG7Q96K78 797 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 SDF2Q99470 211 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 ACBD3Q9H3P7 528 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 WDR55Q9H6Y2 383 aaPredicted RBP19.58■□□□□ 0.72
LIME1-203ENST00000465591 DNAJB12Q9NXW2 375 aaKnown RBP19.58■□□□□ 0.72
LIME1-203ENST00000465591 PACSIN3Q9UKS6 424 aa19.58■□□□□ 0.72
LIME1-203ENST00000465591 GOLGA8QA0A0J9YX86 632 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 CENPVL1A0A0U1RR11 272 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 C7orf72A4D263 438 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 GOLGA8OA6NCC3 632 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 TUBAL3A6NHL2 446 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 A8MXE2 369 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 GOLGA8NF8WBI6 632 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 AQP8O94778 261 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 CPSF4O95639 269 aaKnown RBP19.57■□□□□ 0.72
LIME1-203ENST00000465591 LINGO3P0C6S8 592 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 EPHA3P29320 983 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 IL12AP29459 219 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms