RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MRPL2Q5T653 305 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 METAP1DQ6UB28 335 aaPredicted RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 B3GLCTQ6Y288 498 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 COX18Q8N8Q8 333 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 DOK4Q8TEW6 326 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 TMEM239Q8WW34 195 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 ELSPBP1Q96BH3 223 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 WDR92Q96MX6 357 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 SNX18Q96RF0 628 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 JAM3Q9BX67 310 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 ADAM30Q9UKF2 790 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 C19orf53Q9UNZ5 99 aaPredicted RBP17.04■□□□□ 0.32
SYNE4-204ENST00000465425 CA5BQ9Y2D0 317 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 SPACA6W5XKT8 324 aa17.04■□□□□ 0.32
SYNE4-204ENST00000465425 TTC36A6NLP5 189 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 RASGRP1O95267 797 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 ZGLP1P0C6A0 271 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 SMIM10L1P0DMW3 83 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 GAAP10253 952 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 IFI30P13284 250 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 LAMP2P13473 410 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PRG2P13727 222 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 UGT2B7P16662 529 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 TCEA1P23193 301 aaKnown RBP17.03■□□□□ 0.32
SYNE4-204ENST00000465425 MAPK14Q16539 360 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PLET1Q6UQ28 207 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 CDK20Q8IZL9 346 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 RNF113BQ8IZP6 322 aaKnown RBP17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PFN4Q8NHR9 129 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 UBASH3BQ8TF42 649 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 RERGQ96A58 199 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-204ENST00000465425 SMIM10Q96HG1 83 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 ART5Q96L15 291 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 HS6ST2Q96MM7 605 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PRSS27Q9BQR3 290 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 TMEM168Q9H0V1 697 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 RGS13O14921 159 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PLA2G10O15496 165 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 LDB3O75112 727 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 DNAJB6O75190 326 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 HOXC4P09017 264 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-204ENST00000465425 NID1P14543 1247 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 NT5EP21589 574 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 S100A1P23297 94 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 BDH1Q02338 343 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 OR1Q1Q15612 314 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 FIGLAQ6QHK4 219 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 FN3KQ9H479 309 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 ISG20L2Q9H9L3 353 aaKnown RBP17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PRDM9Q9NQV7 894 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 PCOLCE2Q9UKZ9 415 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 NCKAP1Q9Y2A7 1128 aa17.03■□□□□ 0.32
SYNE4-204ENST00000465425 FAM172BPA6NC97 362 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 AGRPO00253 132 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 FUT1P19526 365 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 GALP22466 123 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 HTR2AP28223 471 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 KIR2DL3P43628 341 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 INPP1P49441 399 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 EVX1P49640 407 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 RNF144AP50876 292 aaPredicted RBP17.02■□□□□ 0.32
SYNE4-204ENST00000465425 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.02■□□□□ 0.32
SYNE4-204ENST00000465425 KLHL12Q53G59 568 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 EOGTQ5NDL2 527 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 MZT2BQ6NZ67 158 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 NIPAL3Q6P499 406 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 MEPCEQ7L2J0 689 aaKnown RBP17.02■□□□□ 0.32
SYNE4-204ENST00000465425 TRIM48Q8IWZ4 208 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 CDRT4Q8N9R6 151 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 FLVCR1-AS1Q8TAF5 88 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 SIPA1Q96FS4 1042 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 TBX5Q99593 518 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 GABRG3Q99928 467 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 ALG8Q9BVK2 526 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 PPP1R3EQ9H7J1 279 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 MED20Q9H944 212 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 FBRSQ9HAH7 460 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 ATP13A2Q9NQ11 1180 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 SATB2Q9UPW6 733 aa17.02■□□□□ 0.32
SYNE4-204ENST00000465425 SHISA3A0PJX4 238 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 OR6C74A6NCV1 312 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 PEX12O00623 359 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 TNFSF14O43557 240 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 RNF13O43567 381 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 RGS9O75916 674 aaPredicted RBP17.02■□□□□ 0.31
SYNE4-204ENST00000465425 SAGP10523 405 aaPredicted RBP17.02■□□□□ 0.31
SYNE4-204ENST00000465425 PRKAR1AP10644 381 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 MAKP20794 623 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 MAP2K3P46734 347 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 SLC16A1P53985 500 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 RPS7P62081 194 aaKnown RBP17.02■□□□□ 0.31
SYNE4-204ENST00000465425 P2RY14Q15391 338 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 PRPF38BQ5VTL8 546 aaKnown RBP17.02■□□□□ 0.31
SYNE4-204ENST00000465425 VASNQ6EMK4 673 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 WDR88Q6ZMY6 472 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 TMEFF1Q8IYR6 380 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 ZFYVE21Q9BQ24 234 aa17.02■□□□□ 0.31
SYNE4-204ENST00000465425 DUSP22Q9NRW4 184 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms