RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SMAD5-AS1Q9Y6J3 95 aa2.78□□□□□ -1.96
HMGXB4-205ENST00000464480 IKBKGQ9Y6K9 419 aa2.78□□□□□ -1.96
HMGXB4-205ENST00000464480 DDX49Q9Y6V7 483 aaKnown RBP2.78□□□□□ -1.96
HMGXB4-205ENST00000464480 METP08581 1390 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 OR6C65A6NJZ3 312 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 E9PLD3 99 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 PPIAL4DF5H284 164 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 DYNC1I1O14576 645 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 STX7O15400 261 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 TSC22D2O75157 780 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 NOL4O94818 638 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 ADSSP30520 456 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 PRKAR2BP31323 418 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 IL2RGP31785 369 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SOX6P35712 828 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SH3BGRP55822 239 aaPredicted RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 RPL32P62910 135 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 RPL8P62917 257 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 IFT88Q13099 833 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 ZNF154Q13106 437 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 KCNJ11Q14654 390 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SLC22A10Q63ZE4 541 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 NCR3LG1Q68D85 454 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 PVRIGQ6DKI7 326 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 UFSP1Q6NVU6 142 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 C16orf87Q6PH81 154 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 ARMCX2Q7L311 632 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 IQCF2Q8IXL9 164 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 GPR65Q8IYL9 337 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SPEM1Q8N4L4 309 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 ZNF525Q8N782 197 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 CNIH3Q8TBE1 160 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 MRAPQ8TCY5 172 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 RAET1EQ8TD07 263 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 C17orf50Q8WW18 174 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 TRUB1Q8WWH5 349 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SERAC1Q96JX3 654 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 TSSK1BQ9BXA7 367 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 CRNKL1Q9BZJ0 848 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SUN2Q9UH99 717 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 BLOC1S6Q9UL45 172 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 SAMD4AQ9UPU9 718 aaKnown RBP2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 L3MBTL1Q9Y468 752 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 FLVCR1Q9Y5Y0 555 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 MAD1L1Q9Y6D9 718 aa2.77□□□□□ -1.97
HMGXB4-205ENST00000464480 A0A1W2PQ72 361 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 ERICH4A6NGS2 130 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 CYSRT1A8MQ03 144 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 PHOX2AO14813 284 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 TBX19O60806 448 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 SRSF10O75494 262 aaKnown RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 UFL1O94874 794 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 TBXA2RP21731 343 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 FASP25445 335 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 DHPSP49366 369 aaPredicted RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 ERVPABLB-1P60509 514 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 VLDLRP98155 873 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 CSTF1Q05048 431 aaKnown RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 PDK4Q16654 411 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 PAGE2BQ5JRK9 111 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 SLC25A24Q6NUK1 477 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 ACSM5Q6NUN0 579 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 BLOC1S2Q6QNY1 142 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 PAMR1Q6UXH9 720 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 CYS1Q717R9 158 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 APTXQ7Z2E3 356 aaKnown RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 SERPINA9Q86WD7 417 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 GRAMD2AQ8IUY3 354 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 ZBED8Q8IZ13 594 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 OR9A4Q8NGU2 314 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 M1APQ8TC57 530 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 PNPT1Q8TCS8 783 aaKnown RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 SPRYD4Q8WW59 207 aaPredicted RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 RAB7BQ96AH8 199 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 ZNF396Q96N95 335 aaPredicted RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 LZTS2Q9BRK4 669 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 IKZF5Q9H5V7 419 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 RRAGDQ9NQL2 400 aaPredicted RBP2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 AIPL1Q9NZN9 384 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 OR10H1Q9Y4A9 318 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 MYO15BQ96JP2 1530 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 RALGAPA1Q6GYQ0 2036 aa2.76□□□□□ -1.97
HMGXB4-205ENST00000464480 RAD50Q92878 1312 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 ESYT2A0FGR8 921 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 FRG2CA6NGY1 282 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 DHRS7CA6NNS2 312 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 B4DXG7 233 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 CPLX1O14810 134 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 NUDT21O43809 227 aaKnown RBP2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 EFNA2O43921 213 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 BCAS1O75363 584 aaPredicted RBP2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 KIAA0754O94854 1291 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 IGF1P05019 195 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 SERPINA2P20848 420 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 ATP6V1C1P21283 382 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 DRD5P21918 477 aa2.75□□□□□ -1.97
HMGXB4-205ENST00000464480 HNRNPA2B1P22626 353 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms