RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NFYAP23511 347 aaPredicted RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 GIFP27352 417 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 IMPA1P29218 277 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 MNDAP41218 407 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PRLHRP49683 370 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 CCR9P51686 369 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 BLVRAP53004 296 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 GAS1P54826 345 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 DLX5P56178 289 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 NRG3P56975 720 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ACTA2P62736 377 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ACTG2P63267 376 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SMAD3P84022 425 aaKnown RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PRR5P85299 388 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ZXDBP98169 803 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 B4GALNT1Q00973 533 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ARHGAP19Q14CB8 494 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 LGALSLQ3ZCW2 172 aaPredicted RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 FLYWCH1Q4VC44 716 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 EIPR1Q53HC9 387 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 UBE2NLQ5JXB2 153 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PRAMEF9Q5VWM5 478 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC8B1Q6J4K2 584 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 FUT10Q6P4F1 479 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SMARCD3Q6STE5 483 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PAQR6Q6TCH4 344 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 TMIGD1Q6UXZ0 262 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 TFAP2EQ6VUC0 442 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF852Q6ZMS4 543 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 BEND4Q6ZU67 534 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 PGAP1Q75T13 922 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 OVCH1Q7RTY7 1134 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ZER1Q7Z7L7 766 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 CDK20Q8IZL9 346 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 HORMAD2Q8N7B1 307 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 MORN4Q8NDC4 146 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 TTLQ8NG68 377 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 GPR32P1Q8NGA4 272 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 OR9A1PQ8NGU1 263 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 FIBINQ8TAL6 211 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 TRMT10AQ8TBZ6 339 aaKnown RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SPRYD4Q8WW59 207 aaPredicted RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SORCS1Q8WY21 1168 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 THRSPQ92748 146 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 KAT2AQ92830 837 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 FGF11Q92914 225 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 NEIL2Q969S2 332 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF689Q96CS4 500 aaPredicted RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ALG14Q96F25 216 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 LRIG1Q96JA1 1093 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 RBP7Q96R05 134 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 RBCK1Q9BYM8 510 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SHARPINQ9H0F6 387 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC25A32Q9H2D1 315 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 RHBGQ9H310 441 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 C11orf49Q9H6J7 331 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 IFT46Q9NQC8 304 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 NANSQ9NR45 359 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 MAN2C1Q9NTJ4 1040 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 TAS2R8Q9NYW2 309 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 RPS6KB2Q9UBS0 482 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 FBXL3Q9UKT7 428 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 EXO1Q9UQ84 846 aaKnown RBP6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 CCDC88CQ9P219 2028 aa6.72□□□□□ -1.33
CLSTN1-204ENST00000464286 KIAA1671Q9BY89 1806 aa6.71□□□□□ -1.33
CLSTN1-204ENST00000464286 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 C17orf113A0A1B0GUU1 675 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 A0A1W2PP55 124 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC5A10A0PJK1 596 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 TRABD2BA6NFA1 517 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 CD8B2A6NJW9 211 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 DUXAA6NLW8 204 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 MPTX1A8MV57 137 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 A8MXK9 166 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 NUDT19A8MXV4 375 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 FAM25EA8MYX2 175 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 SMLR1H3BR10 107 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 GABARAPH6UMI1 98 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 AIPO00170 330 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 HMGN4O00479 90 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 FLRT2O43155 660 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 PLPP2O43688 288 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 GPRIN2O60269 458 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 PPM1BO75688 479 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 RCBTB2O95199 551 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 ETHE1O95571 254 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC16A8O95907 504 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 IFNGP01579 166 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 TP53P04637 393 aaPredicted RBP6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 ASGR2P07307 311 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 RAB40ALP0C0E4 278 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 IRF1P10914 325 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 CD8BP10966 210 aa6.71□□□□□ -1.34
CLSTN1-204ENST00000464286 BMP7P18075 431 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms