RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 DNAJB13P59910 316 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TRA2BP62995 288 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 TFF3Q07654 80 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 EXOSC7Q15024 291 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 ZNF630Q2M218 657 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 TRMT12Q53H54 448 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 CCNYL2Q5T2Q4 361 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 LGSNQ5TDP6 509 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 PRAMEF20Q5VT98 475 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TTC19Q6DKK2 380 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 OPN5Q6U736 354 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 NPSR1Q6W5P4 371 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TRILQ7L0X0 811 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TRABD2AQ86V40 505 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SLC22A9Q8IVM8 553 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 C4orf33Q8N1A6 199 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 LRRC25Q8N386 305 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 FBXW8Q8N3Y1 598 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 FAM109AQ8N4B1 249 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 BANPQ8N9N5 519 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 C17orf47Q8NEP4 570 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 OR4K14Q8NGD5 310 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 OR5L2Q8NGL0 311 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 OR6Y1Q8NGX8 325 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 OR2T11Q8NH01 316 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 FAM57AQ8TBR7 257 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 METTL6Q8TCB7 284 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 ZNF675Q8TD23 568 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 C16orf78Q8WTQ4 265 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 PHF10Q8WUB8 498 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 UBLCP1Q8WVY7 318 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 HGDQ93099 445 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 RBM18Q96H35 190 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 ART5Q96L15 291 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 FCRL1Q96LA6 429 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TREX2Q9BQ50 279 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 VKORC1Q9BQB6 163 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 FAM173AQ9BQD7 235 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 PELOQ9BRX2 385 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 GATA5Q9BWX5 397 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 EBPLQ9BY08 206 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 ITPAQ9BY32 194 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 NXF5Q9H1B4 397 aaKnown RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 DEFB127Q9H1M4 99 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 UBQLN3Q9H347 655 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 MS4A5Q9H3V2 200 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 TUBB1Q9H4B7 451 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 IL1RL2Q9HB29 575 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 PNPLA3Q9NST1 481 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SACM1LQ9NTJ5 587 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SPRR3Q9UBC9 169 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 VPS29Q9UBQ0 182 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 COPS7AQ9UBW8 275 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 DCDC2Q9UHG0 476 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 LGALS13Q9UHV8 139 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 SNX6Q9UNH7 406 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 ERVK-11Q9UQG0 969 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 ENTPD4Q9Y227 616 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 PLLPQ9Y342 182 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 LRP12Q9Y561 859 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 FAM215AQ9Y5M1 114 aa4.86□□□□□ -1.63
CD46-211ENST00000464082 KLF2Q9Y5W3 355 aaPredicted RBP4.86□□□□□ -1.63
CD46-211ENST00000464082 ROS1P08922 2347 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 SMIM23A6NLE4 172 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 C17orf51A8MQB3 221 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 TMEM233B4DJY2 109 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 PRSS44E7EML9 344 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ZNF500O60304 480 aaPredicted RBP4.85□□□□□ -1.63
CD46-211ENST00000464082 OR10H2O60403 315 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 CDC40O60508 579 aaKnown RBP eCLIP4.85□□□□□ -1.63
CD46-211ENST00000464082 CDH16O75309 829 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 UGT2B11O75310 529 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ULK1O75385 1050 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ERAL1O75616 437 aaKnown RBP4.85□□□□□ -1.63
CD46-211ENST00000464082 PSMG1O95456 288 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 MLYCDO95822 493 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 GASTP01350 101 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 KRT6AP02538 564 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 KRT6BP04259 564 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ENO1P06733 434 aaKnown RBP4.85□□□□□ -1.63
CD46-211ENST00000464082 CHRNGP07510 517 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ABCB1P08183 1280 aaPredicted RBP4.85□□□□□ -1.63
CD46-211ENST00000464082 CT45A8P0DMV1 189 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 CT45A9P0DMV2 189 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 MYL2P10916 166 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 COX7A2P14406 83 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ABOP16442 354 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 AGAP20933 346 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 NT5EP21589 574 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 PRPH2P23942 346 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 CTSSP25774 331 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 ABCD3P28288 659 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 HMOX2P30519 316 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 KRT6CP48668 564 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 NAGLUP54802 743 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 NUP107P57740 925 aa4.85□□□□□ -1.63
CD46-211ENST00000464082 PPIAP62937 165 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms