RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 OR2L13Q8N349 312 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 ACTRT2Q8TDY3 377 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 RNF128Q8TEB7 428 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 ZNF483Q8TF39 744 aaPredicted RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 NPAS1Q99742 590 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 LMF2Q9BU23 707 aaKnown RBP12.84□□□□□ -0.35
SMC1A-204ENST00000463684 CBLN4Q9NTU7 201 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 MED17Q9NVC6 651 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 GRHL1Q9NZI5 618 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 GRID1Q9ULK0 1009 aa12.84□□□□□ -0.35
SMC1A-204ENST00000463684 ALG1L2C9J202 215 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ABCD4O14678 606 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ANXA4P09525 319 aaPredicted RBP12.83□□□□□ -0.36
SMC1A-204ENST00000463684 IGHV4-31P0DP07 118 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 HPGDP15428 266 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 CHN1P15882 459 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
SMC1A-204ENST00000463684 DDCP20711 480 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 NTSP30990 170 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 TIA1P31483 386 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMC1A-204ENST00000463684 TTKP33981 857 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 SFTPDP35247 375 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 SLC18A2Q05940 514 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 RUNX1T1Q06455 604 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 RASA2Q15283 850 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 TSNAXIP1Q2TAA8 658 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 PLPPR5Q32ZL2 321 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 TCHHL1Q5QJ38 904 aaPredicted RBP12.83□□□□□ -0.36
SMC1A-204ENST00000463684 TDRPQ86YL5 185 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 FBXL14Q8N1E6 418 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 GATSQ8NAP1 163 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 GPR151Q8TDV0 419 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 PROX1Q92786 737 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ELP4Q96EB1 424 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 APIPQ96GX9 242 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 MANSC1Q9H8J5 431 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 MIEF1Q9NQG6 463 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF225Q9UK10 706 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 POU2F3Q9UKI9 436 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 KCNS2Q9ULS6 477 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
SMC1A-204ENST00000463684 ANK2Q01484 3957 aa12.83□□□□□ -0.36
SMC1A-204ENST00000463684 GXYLT2A0PJZ3 443 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 GJE1A6NN92 205 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF814B7Z6K7 855 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 LYZL6O75951 148 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 PSMG1O95456 288 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 OXSR1O95747 527 aaPredicted RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 IGKV1D-16P01601 117 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 HNF1AP20823 631 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 USF1P22415 310 aaPredicted RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 HMOX2P30519 316 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 HSD17B3P37058 310 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 GZMKP49863 264 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 CLCQ05315 142 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 BTKQ06187 659 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 SLC29A2Q14542 456 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 VPS26BQ4G0F5 336 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 FAM166AQ6J272 317 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 SEZ6L2Q6UXD5 910 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 Q6ZSR9 355 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 Q6ZT83 130 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 FCRLAQ7L513 359 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 SLC43A2Q8N370 569 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 OR4C3Q8NH37 302 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 METTL6Q8TCB7 284 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 FBXO25Q8TCJ0 367 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 PIK3R3Q92569 461 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 SH3YL1Q96HL8 342 aaPredicted RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 MRPL57Q9BQC6 102 aaKnown RBP12.82□□□□□ -0.36
SMC1A-204ENST00000463684 EBPLQ9BY08 206 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 GLIPR2Q9H4G4 154 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 MGAT4BQ9UQ53 548 aa12.82□□□□□ -0.36
SMC1A-204ENST00000463684 RAD51CO43502 376 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 NGFRP08138 427 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 CSF3P09919 207 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 COL6A2P12110 1019 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 BMP4P12644 408 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 GNG11P61952 73 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 SQLEQ14534 574 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 GLE1Q53GS7 698 aaKnown RBP12.81□□□□□ -0.36
SMC1A-204ENST00000463684 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 FAM219BQ5XKK7 198 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 C11orf71Q6IPW1 123 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 GALNT18Q6P9A2 607 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms