RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RASSF6Q6ZTQ3 369 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 PRSS58Q8IYP2 241 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 OR4C3Q8NH37 302 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 TRUB1Q8WWH5 349 aaKnown RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 TSSK6Q9BXA6 273 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 POLDIP3Q9BY77 421 aaKnown RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 CNOT2Q9NZN8 540 aaKnown RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 SEMA5BQ9P283 1151 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 BLACEA4D250 179 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 RFPL3O75679 317 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 APOL3O95236 402 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 CKMT1AP12532 417 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 MAKP20794 623 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 DRD5P21918 477 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 IFNGR2P38484 337 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 SMSP52788 366 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 SOWAHCQ53LP3 525 aaPredicted RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 SLC27A4Q6P1M0 643 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 PAQR6Q6TCH4 344 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 MAML2Q8IZL2 1156 aaPredicted RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 FAM26EQ8N5C1 309 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 BCORP1Q8N888 145 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 TEX47Q8TBZ9 253 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 SENP5Q96HI0 755 aaPredicted RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 DPH1Q9BZG8 443 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 ENKD1Q9H0I2 346 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 POLE3Q9NRF9 147 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 ZNF223Q9UK11 482 aaPredicted RBP11.84□□□□□ -0.51
VAPB-203ENST00000463370 PILRBQ9UKJ0 227 aa11.84□□□□□ -0.51
VAPB-203ENST00000463370 CPED1A4D0V7 1026 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 NPIPB9F8W1W9 429 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 ACAA2P42765 397 aaKnown RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 FXYD6P3P58550 94 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 OCLNQ16625 522 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 ZNF620Q6ZNG0 422 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 MRGPREQ86SM8 312 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 EFHD2Q96C19 240 aaPredicted RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 Q9N2J8 555 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 IGKV3D-11A0A0A0MRZ8 115 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 SLC2A10O95528 541 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 ZGLP1P0C6A0 271 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 PIPP12273 146 aaPredicted RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 GADD45AP24522 165 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 EMP3P54852 163 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 HLA-BQ31612 363 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 WDR74Q6RFH5 385 aaPredicted RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 SAP25Q8TEE9 199 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 TMEM239Q8WW34 195 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 FCGR1BQ92637 280 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 PIGKQ92643 395 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 Q96MT0 163 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 RNF167Q9H6Y7 350 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 MEPEQ9NQ76 525 aaPredicted RBP11.83□□□□□ -0.52
VAPB-203ENST00000463370 FGF21Q9NSA1 209 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 IL20Q9NYY1 176 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 NLGN3Q9NZ94 848 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 CBLCQ9ULV8 474 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 CACNA1EQ15878 2313 aa11.83□□□□□ -0.52
VAPB-203ENST00000463370 RP1P56715 2156 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 A0A1B0GTQ1 180 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SIGLEC6O43699 453 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 NGFRP08138 427 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 HOXA6P31267 233 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 STAT5AP42229 794 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SLC37A1P57057 533 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 ZXDAP98168 799 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 DSG2Q14126 1118 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 MED22Q15528 200 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 PLK5Q496M5 336 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 ARMCX4Q5H9R4 360 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 DESI1Q6ICB0 168 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SLC46A3Q7Z3Q1 461 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 GPR135Q8IZ08 494 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 SAMD8Q96LT4 415 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 MESP1Q9BRJ9 268 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 NDC1Q9BTX1 674 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 PRMT8Q9NR22 394 aaPredicted RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 ENAMQ9NRM1 1142 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 TBC1D23Q9NUY8 699 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 TESQ9UGI8 421 aaKnown RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 TP53BP1Q12888 1972 aaPredicted RBP11.82□□□□□ -0.52
VAPB-203ENST00000463370 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 CCDC163A0A0D9SF12 145 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 A0A1B0GWA3 101 aa11.82□□□□□ -0.52
VAPB-203ENST00000463370 A0A1B0GX12 115 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms