RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 C3orf38Q5JPI3 329 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 ZNF613Q6PF04 617 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 CHCHD6Q9BRQ6 235 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 TEX12Q9BXU0 123 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 FGF20Q9NP95 211 aaPredicted RBP18.72■□□□□ 0.59
CCM2-203ENST00000461377 ENAMQ9NRM1 1142 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 MED17Q9NVC6 651 aa18.72■□□□□ 0.59
CCM2-203ENST00000461377 GON4LQ3T8J9 2241 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 THADAQ6YHU6 1953 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 IGHV1OR21-1A0A087WYE8 117 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 UNC119BA6NIH7 251 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 H3BMH7 237 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 BCAT2O15382 392 aaPredicted RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 ENDOUP21128 410 aaKnown RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 PTNP21246 168 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 GALNSP34059 522 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 AFF3P51826 1226 aaKnown RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 OR1D5P58170 312 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 PRKCDQ05655 676 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 RAB40BQ12829 278 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 KCNAB1Q14722 419 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 PAQR6Q6TCH4 344 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 IGFN1Q86VF2 1251 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 CARFQ8N187 725 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 MFSD4AQ8N468 514 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 TMCO5AQ8N6Q1 288 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 PFN4Q8NHR9 129 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 BRIX1Q8TDN6 353 aaKnown RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 RNFT2Q96EX2 444 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 CNPPD1Q9BV87 410 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 DUSP15Q9H1R2 295 aaPredicted RBP18.71■□□□□ 0.59
CCM2-203ENST00000461377 RNF167Q9H6Y7 350 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 ERVK-19Q9WJR5 959 aa18.71■□□□□ 0.59
CCM2-203ENST00000461377 METTL15A6NJ78 407 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 NPIPB9F8W1W9 429 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 MYL12BO14950 172 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 HBQ1P09105 142 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 MAKP20794 623 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 CXCL12P48061 93 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCM2-203ENST00000461377 SERTAD2Q14140 314 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ZNF141Q15928 474 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 AADACL4Q5VUY2 407 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 RCBTB1Q8NDN9 531 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 OR2T33Q8NG76 320 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 AHCYL2Q96HN2 611 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 SAMD8Q96LT4 415 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 PELOQ9BRX2 385 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 DPH1Q9BZG8 443 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 TMEM27Q9HBJ8 222 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 Q9N2J8 555 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 DNAJB12Q9NXW2 375 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 CCDC59Q9P031 241 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 STK25O00506 426 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 NUDT21O43809 227 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 HYAL3O43820 417 aaPredicted RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 CH25HO95992 272 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ETV5P41161 510 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ETV1P50549 477 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 TMEM44Q2T9K0 475 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 AMZ1Q400G9 498 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ZNF404Q494X3 552 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ZNF614Q8N883 585 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ZNF615Q8N8J6 731 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 C16orf52Q8NHV5 167 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 MCFD2Q8NI22 146 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 OR10A5Q9H207 317 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 CUTCQ9NTM9 273 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 C20orf141Q9NUB4 165 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 SIDT1Q9NXL6 827 aaKnown RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 COLQQ9Y215 455 aaPredicted RBP18.7■□□□□ 0.58
CCM2-203ENST00000461377 A3GALT2U3KPV4 340 aa18.7■□□□□ 0.58
CCM2-203ENST00000461377 A0A0B4J2E0 115 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 A0A1B0GX12 115 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 DSCR3O14972 297 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 CLPSP04118 112 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 HMGN1P05114 100 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 ZGLP1P0C6A0 271 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 CT45A8P0DMV1 189 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 CT45A9P0DMV2 189 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 BMP4P12644 408 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 IFI30P13284 250 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 ACAA2P42765 397 aaKnown RBP18.69■□□□□ 0.58
CCM2-203ENST00000461377 MTNR1AP48039 350 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 PGDP52209 483 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 MLLT11Q13015 90 aaPredicted RBP18.69■□□□□ 0.58
CCM2-203ENST00000461377 BIKQ13323 160 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 C1DQ13901 141 aaKnown RBP18.69■□□□□ 0.58
CCM2-203ENST00000461377 FGFBP1Q14512 234 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 CT45A2Q5DJT8 189 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 WDR45BQ5MNZ6 344 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 Q6ZNX1 250 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 SLC35B4Q969S0 331 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 G6PC3Q9BUM1 346 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 NXF2Q9GZY0 626 aaKnown RBP18.69■□□□□ 0.58
CCM2-203ENST00000461377 MMP27Q9H306 513 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 OR52D1Q9H346 318 aa18.69■□□□□ 0.58
CCM2-203ENST00000461377 LANCL2Q9NS86 450 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms