RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 KLHL15Q96M94 604 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 TIGARQ9NQ88 270 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 MED17Q9NVC6 651 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 CDC42EP3Q9UKI2 254 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 ACTL7BQ9Y614 415 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 RNF223E7ERA6 249 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 ETV2O00321 342 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 NDUFB5O43674 189 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 PLAUP00749 431 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 CD3EP07766 207 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SOD3P08294 240 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 ABHD2P08910 425 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SNRPAP09012 282 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 FAM157CP0CG43 387 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 COX5AP20674 150 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 CKAP4Q07065 602 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 GLE1Q53GS7 698 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 CPTPQ5TA50 214 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 FIGNL1Q6PIW4 674 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 MTERF4Q7Z6M4 381 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 WFDC8Q8IUA0 241 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 PHC2Q8IXK0 858 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SLC43A2Q8N370 569 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 OR5M1Q8NGP8 315 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 ZFP28Q8NHY6 868 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 MRRFQ96E11 262 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 CCDC126Q96EE4 140 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 RADILQ96JH8 1075 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 TRAF4Q9BUZ4 470 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 BCO1Q9HAY6 547 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 GIN1Q9NXP7 522 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 DMGDHQ9UI17 866 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 VDAC3Q9Y277 283 aa12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 MAGED1Q9Y5V3 778 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-207ENST00000461228 A0A096LNT2 108 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 A0A1W2PP18 115 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 CXCL13O43927 109 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 GSTA1P08263 222 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 LINGO3P0C6S8 592 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 TSPAN8P19075 237 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 DSCR9P59020 149 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 SLC18A2Q05940 514 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 TAB1Q15750 504 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 CHRFAM7AQ494W8 412 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 TMEM201Q5SNT2 666 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 Q6ZT83 130 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 ACMSDQ8TDX5 336 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 KISS1RQ969F8 398 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 FCRL1Q96LA6 429 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 RNF145Q96MT1 663 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 FMO2Q99518 471 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 CCT7Q99832 543 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 EBPLQ9BY08 206 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 UBQLN4Q9NRR5 601 aa12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 ACSS1Q9NUB1 689 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-207ENST00000461228 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 IGKV1D-16P01601 117 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 PRPS2P11908 318 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 IL32P24001 234 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 SERPINB4P48594 390 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 ETF1P62495 437 aaKnown RBP12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 C2orf80Q0P641 193 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 ITGADQ13349 1161 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 PDE7AQ13946 482 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 PGGHGQ32M88 737 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 C6orf52Q5T4I8 152 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 RAB3IL1Q8TBN0 382 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 GIMAP5Q96F15 307 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 REXO5Q96IC2 774 aaKnown RBP12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 GSTO2Q9H4Y5 243 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 DUSP22Q9NRW4 184 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 LPAR3Q9UBY5 353 aa12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 GPC6Q9Y625 555 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-207ENST00000461228 A0A0J9YW62 118 aa12.93□□□□□ -0.34
DNMT3A-207ENST00000461228 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-207ENST00000461228 A8MV72 311 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-207ENST00000461228 TNFSF11O14788 317 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms