RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CBR3O75828 277 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 TRAPPC6AO75865 159 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 HPNP05981 417 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 SLC6A2P23975 617 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 PRDX6P30041 224 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 CPA2P48052 419 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 GZMMP51124 257 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 PLAURQ03405 335 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 ZNF117Q03924 483 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 C17orf67Q0P5P2 114 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 CBLN3Q6UW01 205 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 TRILQ7L0X0 811 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 GHDCQ8N2G8 530 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 FITM2Q8N6M3 262 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 ZNF527Q8NB42 609 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 FAM83FQ8NEG4 500 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 NFKBIDQ8NI38 313 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 PHOSPHO1Q8TCT1 267 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 ARSGQ96EG1 525 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 LRRC37BQ96QE4 947 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 OR2B2Q9GZK3 357 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 KAT8Q9H7Z6 458 aaKnown RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 SDHAF3Q9NRP4 125 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 GID8Q9NWU2 228 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 THUMPD1Q9NXG2 353 aaKnown RBP12.73□□□□□ -0.37
HDLBP-229ENST00000460826 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
HDLBP-229ENST00000460826 AGAP5A6NIR3 686 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 NDUFAB1O14561 156 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 NPPAP01160 153 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 RPS4Y1P22090 263 aaKnown RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TCEA1P23193 301 aaKnown RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 DPP4P27487 766 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 SRD5A2P31213 254 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 CRISP3P54108 245 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 FGFBP1Q14512 234 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TOMM20Q15388 145 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 ATCAYQ86WG3 371 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 ZZZ3Q8IYH5 903 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 OR10A6Q8NH74 314 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 CMTM5Q96DZ9 223 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TREX2Q9BQ50 279 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 GPATCH1Q9BRR8 931 aaKnown RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 RSPO3Q9BXY4 272 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 PIF1Q9H611 641 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TMEM38AQ9H6F2 299 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 MTHFD2LQ9H903 347 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 CMTM6Q9NX76 183 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 GMPR2Q9P2T1 348 aaKnown RBP12.72□□□□□ -0.37
HDLBP-229ENST00000460826 SPRR3Q9UBC9 169 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TNFRSF10DQ9UBN6 386 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 DKKL1Q9UK85 242 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 USP22Q9UPT9 525 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 CARD8Q9Y2G2 431 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 SLC6A5Q9Y345 797 aa12.72□□□□□ -0.37
HDLBP-229ENST00000460826 TRGV5A0A0B4J1U4 118 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 A0A1B0GVC2 190 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 TMEM247A6NEH6 219 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 HNRNPCL2B2RXH8 293 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 J3QKU1 62 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 HCRTR2O43614 444 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 ZIC3O60481 467 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 HNRNPCL1O60812 293 aaKnown RBP12.71□□□□□ -0.37
HDLBP-229ENST00000460826 PGM3O95394 542 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 NUDT2P50583 147 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 CDK6Q00534 326 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 SCARB2Q14108 478 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 CYP51A1Q16850 503 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
HDLBP-229ENST00000460826 C8orf82Q6P1X6 216 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-229ENST00000460826 ARSKQ6UWY0 536 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 CALHM3Q86XJ0 350 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 VRK2Q86Y07 508 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 MISPQ8IVT2 679 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 FBXO27Q8NI29 283 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 NEIL3Q8TAT5 605 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 ZNF524Q96C55 264 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 C1GALT1C1Q96EU7 318 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 NPAS1Q99742 590 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 EXO5Q9H790 373 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 EFCAB1Q9HAE3 211 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 CALML5Q9NZT1 146 aa12.71□□□□□ -0.37
HDLBP-229ENST00000460826 SUCOQ9UBS9 1254 aaKnown RBP12.71□□□□□ -0.37
HDLBP-229ENST00000460826 LRRK2Q5S007 2527 aa12.7□□□□□ -0.38
HDLBP-229ENST00000460826 CCT8L1PA6NM43 557 aa12.7□□□□□ -0.38
HDLBP-229ENST00000460826 SHISA8B8ZZ34 492 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms