RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 UBDO15205 165 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 SLC22A3O75751 556 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 AK1P00568 194 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 PEPDP12955 493 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 POU3F2P20265 443 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 MSX1P28360 303 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 CHI3L1P36222 383 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 RNF144AP50876 292 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 ATP12AP54707 1039 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 SLC25A35Q3KQZ1 300 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 GLYR1Q49A26 553 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 KLHL26Q53HC5 615 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
THBS3-204ENST00000460050 TNFAIP8L2Q6P589 184 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ADGRE4PQ86SQ3 457 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 GOT1L1Q8NHS2 421 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 PHOSPHO1Q8TCT1 267 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 NEURL3Q96EH8 262 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 PANX1Q96RD7 426 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 PIGQQ9BRB3 760 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 INPP5KQ9BT40 448 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 HOXD1Q9GZZ0 328 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 TCF7L2Q9NQB0 619 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 EXD2Q9NVH0 621 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ZIM2Q9NZV7 527 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ZNF337Q9Y3M9 751 aa12.89□□□□□ -0.35
THBS3-204ENST00000460050 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
THBS3-204ENST00000460050 H3BML4 177 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 DVL2O14641 736 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 POLR3GO15318 223 aaPredicted RBP12.88□□□□□ -0.35
THBS3-204ENST00000460050 OIP5O43482 229 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 HCRTR2O43614 444 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 TGDSO95455 350 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 AGR2O95994 175 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 C1QCP02747 245 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 OR12D1P0DN82 309 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 PRF1P14222 555 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 BMP5P22003 454 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 CDKN2CP42773 168 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 KHKP50053 298 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 ZNF41P51814 821 aaPredicted RBP12.88□□□□□ -0.35
THBS3-204ENST00000460050 ZNF136P52737 540 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 ZNF117Q03924 483 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 LRRC74AQ0VAA2 488 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 TMEM44Q2T9K0 475 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 ARHGAP11BQ3KRB8 267 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 OLIG3Q7RTU3 272 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
THBS3-204ENST00000460050 MIER2Q8N344 545 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 MEIOBQ8N635 442 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 TRIML2Q8N7C3 387 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 ZNF614Q8N883 585 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 RELL2Q8NC24 303 aaPredicted RBP12.88□□□□□ -0.35
THBS3-204ENST00000460050 OR9I1Q8NGQ6 314 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 B4GALNT2Q8NHY0 566 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 XAGE5Q8WWM1 108 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 RAB8BQ92930 207 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 MED17Q9NVC6 651 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
THBS3-204ENST00000460050 A0A087WZY1 265 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 H0YC42 278 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 H3BNH8 94 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 SEC14L5O43304 696 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 TNFRSF21O75509 655 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 STX11O75558 287 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 IL6P05231 212 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 GSNP06396 782 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 ZNF17P17021 662 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 IGFBP2P18065 325 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 IDH3AP50213 366 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 SUCLG1P53597 346 aaKnown RBP12.87□□□□□ -0.35
THBS3-204ENST00000460050 TPD52P55327 224 aaPredicted RBP12.87□□□□□ -0.35
THBS3-204ENST00000460050 CLDN20P56880 219 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 GPR68Q15743 365 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 PLPPR5Q32ZL2 321 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 PDZK1Q5T2W1 519 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 HEPHL1Q6MZM0 1159 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 DNAJC14Q6Y2X3 702 aaPredicted RBP12.87□□□□□ -0.35
THBS3-204ENST00000460050 ZNF621Q6ZSS3 439 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 GDF7Q7Z4P5 450 aa12.87□□□□□ -0.35
THBS3-204ENST00000460050 GRAMD2AQ8IUY3 354 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms