RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 GPR4P46093 362 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 DGKEP52429 567 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF136P52737 540 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ATP12AP54707 1039 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ACTR1AP61163 376 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 POU6F2P78424 691 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MRPS21P82921 87 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 DAB2P98082 770 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PITPNAQ00169 270 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 FOXK2Q01167 660 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 HSF2Q03933 536 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CD300CQ08708 224 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 BIKQ13323 160 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ANGPT1Q15389 498 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 BAK1Q16611 211 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 DUSP5Q16690 384 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CLEC12AQ5QGZ9 265 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 OR2G6Q5TZ20 316 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SLC30A6Q6NXT4 461 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 FIGLAQ6QHK4 219 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 FAM111BQ6SJ93 734 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SMARCD3Q6STE5 483 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PAQR6Q6TCH4 344 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ENPP7Q6UWV6 458 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 RNF44Q7L0R7 432 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 BCDIN3DQ7Z5W3 292 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 LIX1LQ8IVB5 337 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF440Q8IYI8 595 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 Q8N402 240 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CAMKK1Q8N5S9 505 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 POMGNT2Q8NAT1 580 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SLC16A11Q8NCK7 471 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 FAM174AQ8TBP5 190 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SPRYD4Q8WW59 207 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SLC7A6Q92536 515 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 HOXB13Q92826 284 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 KAT2AQ92830 837 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM203Q969S6 136 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CREB3L1Q96BA8 519 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 AHCYL2Q96HN2 611 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 OR2A5Q96R48 311 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 WFDC6Q9BQY6 131 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 C7orf50Q9BRJ6 194 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PELOQ9BRX2 385 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MRI1Q9BV20 369 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ALG8Q9BVK2 526 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 RSPO3Q9BXY4 272 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 GSDMCQ9BYG8 508 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PPP1R3EQ9H7J1 279 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 NIPAL2Q9H841 368 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TIGARQ9NQ88 270 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TRPV5Q9NQA5 729 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CTPS2Q9NRF8 586 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SIDT1Q9NXL6 827 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ING3Q9NXR8 418 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MRPL39Q9NYK5 338 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PTTG3PQ9NZH4 202 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 COPZ2Q9P299 210 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D29Q9UFV1 150 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TEKT2Q9UIF3 430 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MUTYHQ9UIF7 546 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF223Q9UK11 482 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 MRPS33Q9Y291 106 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CARD8Q9Y2G2 431 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 GPR52Q9Y2T5 361 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 NPFFR2Q9Y5X5 522 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 KCNE3Q9Y6H6 103 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 A0A0J9YY10 115 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 A0A1B0GTQ1 180 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 A6NCN8 305 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 PRR23AA6NEV1 266 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 C12orf71A8MTZ7 269 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 B4DXG7 233 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 GTPBP1O00178 669 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 WWP2O00308 870 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 BTN3A3O00478 584 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 BHLHE40O14503 412 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SLC31A1O15431 190 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 PLPP2O43688 288 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 BRINP1O60477 761 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ARL6IP5O75915 188 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 IGF2P01344 180 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 CA3P07451 260 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 PEPDP12955 493 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 IFI30P13284 250 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 NT5EP21589 574 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 DRD1P21728 446 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 WASP42768 502 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 RABIFP47224 123 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 GPR143P51810 404 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 RAB38P57729 211 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 BTG1P62324 171 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 DUSP2Q05923 314 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF155Q12901 538 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 MRPL28Q13084 256 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 IL18Q14116 193 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms