RNA–Protein interactions for RNA: ENST00000459632.5

RNF13-204, Transcript of ring finger protein 13, human

TSL 4

Gene RNF13, Length 1,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-204	ENST00000459632	UBQLN3	Q9H347	655 aa		4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	CLK4	Q9HAZ1	481 aa	Known RBP	4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	IFNK	Q9P0W0	207 aa		4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	NDRG3	Q9UGV2	375 aa		4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	ING1	Q9UK53	422 aa	Predicted RBP	4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	PDE10A	Q9Y233	779 aa		4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	PLCE1	Q9P212	2302 aa		4.85	□□□□□ -1.63
RNF13-204	ENST00000459632	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632		A8MV72	311 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CYR61	O00622	381 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	AHCYL1	O43865	530 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DOK2	O60496	412 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	AVIL	O75366	819 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZNF189	O75820	626 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	TRAPPC6A	O75865	159 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	TNFSF13	O75888	250 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	VAPB	O95292	243 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	IFNA16	P05015	189 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	HPN	P05981	417 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	OGN	P20774	298 aa	Known RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CXCR5	P32302	372 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	RPL22	P35268	128 aa	Known RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	THBS4	P35443	961 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	AHR	P35869	848 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	KRT20	P35900	424 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CPOX	P36551	454 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	FDFT1	P37268	417 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CDK9	P50750	372 aa	Known RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CCR8	P51685	355 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	NAGLU	P54802	743 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	HSD17B7	P56937	341 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CFHR3	Q02985	330 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	TTLL9	Q3SXZ7	439 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DGAT2L7P	Q6IED9	249 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DGAT2L6	Q6ZPD8	337 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CLEC17A	Q6ZS10	378 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	LUZP1	Q86V48	1076 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZNF595	Q8IYB9	648 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	OR52L2P	Q8NGH6	319 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	OR14A16	Q8NHC5	309 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZPLD1	Q8TCW7	415 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DAZL	Q92904	295 aa	Known RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ABTB1	Q969K4	478 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	NEIL2	Q969S2	332 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	SPACA9	Q96E40	222 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	SNF8	Q96H20	258 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ZNF597	Q96LX8	424 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CCDC42	Q96M95	316 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	RUNDC3B	Q96NL0	473 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	QRFPR	Q96P65	431 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	GPR21	Q99679	349 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ANP32E	Q9BTT0	268 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	NPL	Q9BXD5	320 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ANGPTL4	Q9BY76	406 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	PLA2G12A	Q9BZM1	189 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	OR8D2	Q9GZM6	311 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	PIGM	Q9H3S5	423 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ABHD10	Q9NUJ1	306 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CLCF1	Q9UBD9	225 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DTX4	Q9Y2E6	619 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	DHRS7	Q9Y394	339 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	IKBKG	Q9Y6K9	419 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	CLCA3P	Q9Y6N3	262 aa		4.84	□□□□□ -1.63
RNF13-204	ENST00000459632	ARFGEF3	Q5TH69	2177 aa		4.84	□□□□□ -1.64
RNF13-204	ENST00000459632	MGAM2	Q2M2H8	2515 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632		A0A096LNT2	108 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632		A0A1W2PNV4	684 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	URAD	A6NGE7	173 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	EFCAB8	A8MWE9	144 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	C17orf105	B2RV13	164 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	OVOL3	O00110	214 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	SPRY1	O43609	319 aa	Predicted RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	GPRIN2	O60269	458 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	LDB3	O75112	727 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	TBX6	O95947	436 aa	Predicted RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	APRT	P07741	180 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	SERPINA6	P08185	405 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	ZSCAN5DP	P0CG00	497 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	ENO3	P13929	434 aa	Predicted RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	MATN1	P21941	496 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	HNRNPH1	P31943	449 aa	Known RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	ACVR1B	P36896	505 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	CLK3	P49761	638 aa	Known RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	DIO3	P55073	304 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	LIM2	P55344	173 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	RWDD2B	P57060	319 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	RPL15	P61313	204 aa	Known RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	ID2	Q02363	134 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	RCAN2	Q14206	197 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	OASL	Q15646	514 aa	Known RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	NTRK2	Q16620	822 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	PHKG1	Q16816	387 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	KCTD19	Q17RG1	926 aa	Predicted RBP	4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	C6orf52	Q5T4I8	152 aa		4.83	□□□□□ -1.64
RNF13-204	ENST00000459632	UGT3A1	Q6NUS8	523 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms